RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 FASTKD5Q7L8L6 764 aaKnown RBP11.38□□□□□ -0.59
CXCL12-203ENST00000374429 CCNYQ8ND76 341 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 ACTL9Q8TC94 416 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 CLEC4CQ8WTT0 213 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 LPPQ93052 612 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 MIEF2Q96C03 454 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 KIAA1586Q9HCI6 787 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 TMPRSS4Q9NRS4 437 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 TUBGCP4Q9UGJ1 667 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 STK38LQ9Y2H1 464 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 A0A0A6YYK5 440 aaPredicted RBP11.38□□□□□ -0.59
CXCL12-203ENST00000374429 CLDN5O00501 218 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 P4HA2O15460 535 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 CREB3O43889 395 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 SSTR1P30872 391 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 AARSP49588 968 aaKnown RBP eCLIP11.38□□□□□ -0.59
CXCL12-203ENST00000374429 CCNA1P78396 465 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 GCNT1Q02742 428 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 BYSLQ13895 437 aaKnown RBP11.38□□□□□ -0.59
CXCL12-203ENST00000374429 TAF1CQ15572 869 aaPredicted RBP11.38□□□□□ -0.59
CXCL12-203ENST00000374429 NME8Q8N427 588 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 SLC17A8Q8NDX2 589 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 TCP11Q8WWU5 503 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 UPF1Q92900 1129 aaKnown RBP eCLIP11.38□□□□□ -0.59
CXCL12-203ENST00000374429 PGLYRP2Q96PD5 576 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 C17orf75Q9HAS0 396 aa11.38□□□□□ -0.59
CXCL12-203ENST00000374429 A0A087WUV0 522 aaPredicted RBP11.37□□□□□ -0.59
CXCL12-203ENST00000374429 HBP1O60381 514 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 PROSCO94903 275 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 BRAFP15056 766 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 ELF1P32519 619 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 EFNA5P52803 228 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 OTUD4Q01804 1114 aaKnown RBP11.37□□□□□ -0.59
CXCL12-203ENST00000374429 GRIK4Q16099 956 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 ZC3H12AQ5D1E8 599 aaKnown RBP11.37□□□□□ -0.59
CXCL12-203ENST00000374429 CCDC121Q6ZUS5 278 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 CEP57Q86XR8 500 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 BRSK2Q8IWQ3 736 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 OLIG1Q8TAK6 271 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 ZNF473Q8WTR7 871 aaKnown RBP11.37□□□□□ -0.59
CXCL12-203ENST00000374429 CAVIN3Q969G5 261 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 SDCBP2Q9H190 292 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 DHX35Q9H5Z1 703 aaKnown RBP11.37□□□□□ -0.59
CXCL12-203ENST00000374429 TMBIM4Q9HC24 238 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 SPATS2LQ9NUQ6 558 aaKnown RBP11.37□□□□□ -0.59
CXCL12-203ENST00000374429 DPP3Q9NY33 737 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 INTUQ9ULD6 942 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 SLC26A4O43511 780 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 UNGP13051 313 aaPredicted RBP11.37□□□□□ -0.59
CXCL12-203ENST00000374429 STX2P32856 288 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 OAZ1P54368 228 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 MTMR3Q13615 1198 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 DUPD1Q68J44 220 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 XRRA1Q6P2D8 792 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 AGAP3Q96P47 875 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 DPEP3Q9H4B8 488 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 MAP3K20Q9NYL2 800 aaKnown RBP11.37□□□□□ -0.59
CXCL12-203ENST00000374429 CYTH4Q9UIA0 394 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 ABT1Q9ULW3 272 aaKnown RBP11.37□□□□□ -0.59
CXCL12-203ENST00000374429 CHMP2BQ9UQN3 213 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 MYO18AQ92614 2054 aaKnown RBP11.37□□□□□ -0.59
CXCL12-203ENST00000374429 MCM3APO60318 1980 aa11.37□□□□□ -0.59
CXCL12-203ENST00000374429 MEIS3P2A8K0S8 358 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 RASA4BC9J798 803 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 RASA4O43374 803 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 HSPA9P38646 679 aaKnown RBP11.36□□□□□ -0.59
CXCL12-203ENST00000374429 TNFAIP2Q03169 654 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 EFTUD2Q15029 972 aaKnown RBP eCLIP11.36□□□□□ -0.59
CXCL12-203ENST00000374429 ZDHHC24Q6UX98 284 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 FAM131BQ86XD5 332 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 PALM2Q8IXS6 379 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 VPS33BQ9H267 617 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 PABPC3Q9H361 631 aaKnown RBP11.36□□□□□ -0.59
CXCL12-203ENST00000374429 FGFR1OP2Q9NVK5 253 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 IL1RAPL1Q9NZN1 696 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 TSPAN16Q9UKR8 245 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 NOD1Q9Y239 953 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 GOLGA4Q13439 2230 aaKnown RBP11.36□□□□□ -0.59
CXCL12-203ENST00000374429 CEP290O15078 2479 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 TCP11X1B4DZS4 312 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 ACKR2O00590 384 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 ASS1P00966 412 aaKnown RBP11.36□□□□□ -0.59
CXCL12-203ENST00000374429 CYP1A2P05177 515 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 SMPD1P17405 629 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 TBXAS1P24557 533 aaPredicted RBP11.36□□□□□ -0.59
CXCL12-203ENST00000374429 HNRNPH1P31943 449 aaKnown RBP11.36□□□□□ -0.59
CXCL12-203ENST00000374429 GDF10P55107 478 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 ARPP19P56211 112 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 CRADDP78560 199 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 GOLGA7BQ2TAP0 167 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 GNASQ5JWF2 1037 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 CXCL17Q6UXB2 119 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 ZNF354CQ86Y25 554 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 RDM1Q8NG50 284 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 SPATA18Q8TC71 538 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 BRI3BPQ8WY22 251 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 SYT11Q9BT88 431 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 TIPINQ9BVW5 301 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 NMRK2Q9NPI5 230 aa11.36□□□□□ -0.59
CXCL12-203ENST00000374429 NEU2Q9Y3R4 380 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms