RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 AARSP49588 968 aaKnown RBP eCLIP27.85■■■□□ 2.05
ATPAF1-202ENST00000371937 CTCFP49711 727 aaPredicted RBP27.85■■■□□ 2.05
ATPAF1-202ENST00000371937 PPP1R26Q5T8A7 1209 aaPredicted RBP27.85■■■□□ 2.05
ATPAF1-202ENST00000371937 PHLDB2Q86SQ0 1253 aa27.85■■■□□ 2.05
ATPAF1-202ENST00000371937 GOLGA1Q92805 767 aa27.85■■■□□ 2.05
ATPAF1-202ENST00000371937 HESX1Q9UBX0 185 aa27.85■■■□□ 2.05
ATPAF1-202ENST00000371937 TDRD15B5MCY1 1934 aaKnown RBP27.85■■■□□ 2.05
ATPAF1-202ENST00000371937 TMEM110-MUSTN1A8MSY1 372 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 LMO2P25791 158 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 TAP1Q03518 808 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 PTPROQ16827 1216 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 CFAP221Q4G0U5 840 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 NOMO2Q5JPE7 1267 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 C3orf58Q8NDZ4 430 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 DIS3LQ8TF46 1054 aaKnown RBP27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 C18orf8Q96DM3 657 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 SELENOOQ9BVL4 669 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 MIS12Q9H081 205 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 SYNCQ9H7C4 482 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 WDR35Q9P2L0 1181 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 LCMT1Q9UIC8 334 aa27.84■■■□□ 2.05
ATPAF1-202ENST00000371937 GABRDO14764 452 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 B3GAT3O94766 335 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 CXCL10P02778 98 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 LHX1P48742 406 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 GOLGA7BQ2TAP0 167 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 PTPN20Q4JDL3 420 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 CLLU1OSQ5K130 101 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 WSCD1Q658N2 575 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 PAAF1Q9BRP4 392 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 DPEP3Q9H4B8 488 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 CYTH4Q9UIA0 394 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 PCDHB7Q9Y5E2 793 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 CAPN2P17655 700 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 COMTP21964 271 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 LLGL2Q6P1M3 1020 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 DNAJC24Q6P3W2 148 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 DCLRE1AQ6PJP8 1040 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 UBL4BQ8N7F7 174 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 C3orf20Q8ND61 904 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 UBA3Q8TBC4 463 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 FEZF2Q8TBJ5 459 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 BTBD6Q96KE9 485 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 FAM49BQ9NUQ9 324 aa27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 RNF216Q9NWF9 866 aaPredicted RBP27.83■■■□□ 2.05
ATPAF1-202ENST00000371937 SETSIPP0DME0 302 aa27.82■■■□□ 2.04
ATPAF1-202ENST00000371937 CCL23P55773 120 aa27.82■■■□□ 2.04
ATPAF1-202ENST00000371937 PDCLQ13371 301 aa27.82■■■□□ 2.04
ATPAF1-202ENST00000371937 SPATA18Q8TC71 538 aa27.82■■■□□ 2.04
ATPAF1-202ENST00000371937 SCLYQ96I15 445 aa27.82■■■□□ 2.04
ATPAF1-202ENST00000371937 CPXM1Q96SM3 734 aa27.82■■■□□ 2.04
ATPAF1-202ENST00000371937 PPP1R12CQ9BZL4 782 aa27.82■■■□□ 2.04
ATPAF1-202ENST00000371937 WNT8AQ9H1J5 351 aa27.82■■■□□ 2.04
ATPAF1-202ENST00000371937 ATP11BQ9Y2G3 1177 aa27.82■■■□□ 2.04
ATPAF1-202ENST00000371937 SPOPO43791 374 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 ODC1P11926 461 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 IGFBP6P24592 240 aaPredicted RBP27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 SLC1A1P43005 524 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 GABRB2P47870 512 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 GSCP56915 257 aaPredicted RBP27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 RSRC2Q7L4I2 434 aaKnown RBP27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 ZNF572Q7Z3I7 529 aaPredicted RBP27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 OSTM1Q86WC4 334 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 IPO4Q8TEX9 1081 aaKnown RBP27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 RABGGTAQ92696 567 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 C11orf49Q9H6J7 331 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 V9GYY5 206 aaPredicted RBP27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 TANC1Q9C0D5 1861 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 TCRBV5S1A1TA0A578 114 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 ARHGEF37A1IGU5 675 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 ZNF268Q14587 947 aaPredicted RBP27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 ERCC6LQ2NKX8 1250 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 PKDCCQ504Y2 493 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 TIGD5Q53EQ6 642 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 ABI1Q8IZP0 508 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 B3GALNT2Q8NCR0 500 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 TBX21Q9UL17 535 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 LRFN2Q9ULH4 789 aa27.81■■■□□ 2.04
ATPAF1-202ENST00000371937 PDE2AO00408 941 aaPredicted RBP27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 HCRTO43612 131 aa27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 CAPN15O75808 1086 aa27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 CYP2C18P33260 490 aa27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 SNX16P57768 344 aa27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 PSMC1P62191 440 aaKnown RBP27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 RNASELQ05823 741 aaKnown RBP27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 ITIH3Q06033 890 aa27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 DSC1Q08554 894 aa27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 CYP4A22Q5TCH4 519 aa27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 DCUN1D2Q6PH85 259 aa27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 TMEM39AQ9NV64 488 aa27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 DDX43Q9NXZ2 648 aaKnown RBP27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 DSEQ9UL01 958 aa27.8■■■□□ 2.04
ATPAF1-202ENST00000371937 DDX3YO15523 660 aaKnown RBP27.79■■■□□ 2.04
ATPAF1-202ENST00000371937 HOXA2O43364 376 aa27.79■■■□□ 2.04
ATPAF1-202ENST00000371937 PROSCO94903 275 aa27.79■■■□□ 2.04
ATPAF1-202ENST00000371937 PFKMP08237 780 aa27.79■■■□□ 2.04
ATPAF1-202ENST00000371937 ANKRD52Q8NB46 1076 aa27.79■■■□□ 2.04
ATPAF1-202ENST00000371937 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.79■■■□□ 2.04
ATPAF1-202ENST00000371937 STK32AQ8WU08 396 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms