RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 SLC15A5A6NIM6 579 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 TLR3O15455 904 aaKnown RBP13.54□□□□□ -0.24
GPC3-201ENST00000370818 SMNDC1O75940 238 aaKnown RBP eCLIP13.54□□□□□ -0.241e-10■■■□□ 17.8
GPC3-201ENST00000370818 RAP1GAPP47736 663 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 CDH8P55286 799 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 PPARDQ03181 441 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 WDR72Q3MJ13 1102 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 PRAMEF19Q5SWL8 479 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 C12orf50Q8NA57 414 aaPredicted RBP13.54□□□□□ -0.24
GPC3-201ENST00000370818 P3H4Q92791 437 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 SDCBP2Q9H190 292 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 SETD4Q9NVD3 440 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 PARVAQ9NVD7 372 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 CPSF2Q9P2I0 782 aaKnown RBP13.54□□□□□ -0.24
GPC3-201ENST00000370818 PCDHGC3Q9UN70 934 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 ITGB3P05106 788 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 CDH5P33151 784 aaPredicted RBP13.54□□□□□ -0.24
GPC3-201ENST00000370818 COILP38432 576 aaPredicted RBP13.54□□□□□ -0.24
GPC3-201ENST00000370818 DRG2P55039 364 aaKnown RBP13.54□□□□□ -0.24
GPC3-201ENST00000370818 TAS2R40P59535 323 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 SNX1Q13596 522 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 ILDR2Q71H61 639 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 TMC3Q7Z5M5 1100 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 FEZF2Q8TBJ5 459 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 ASB7Q9H672 318 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 MTUS1Q9ULD2 1270 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 L3MBTL1Q9Y468 752 aa13.54□□□□□ -0.24
GPC3-201ENST00000370818 H0YGN5 161 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 EIF4BP23588 611 aaKnown RBP13.53□□□□□ -0.24
GPC3-201ENST00000370818 RIPK1Q13546 671 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 PPP1R7Q15435 360 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 ZNF667Q5HYK9 610 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 MORN1Q5T089 497 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 ZDHHC24Q6UX98 284 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 LRRC45Q96CN5 670 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 LRRC19Q9H756 370 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 GRHL1Q9NZI5 618 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 PLAAQ9Y263 795 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 NFS1Q9Y697 457 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 TMEM191CA6NGB0 347 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 FGFR4P22455 802 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 KCNJ1P48048 391 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 ZNF252P-AS1Q0IIN9 211 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 THEMIS2Q5TEJ8 643 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 SMYD5Q6GMV2 418 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 TMEM35BQ8NCS4 154 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 PPP1R13LQ8WUF5 828 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 PLVAPQ9BX97 442 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 ZNF518BQ9C0D4 1074 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 SMYD3Q9H7B4 428 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 FLRT1Q9NZU1 646 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 CORO1CQ9ULV4 474 aaPredicted RBP13.53□□□□□ -0.24
GPC3-201ENST00000370818 GNEQ9Y223 722 aaKnown RBP13.53□□□□□ -0.24
GPC3-201ENST00000370818 SNX24Q9Y343 169 aa13.53□□□□□ -0.24
GPC3-201ENST00000370818 A6NJR5 290 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 IGF2BP3O00425 579 aaKnown RBP eCLIP13.52□□□□□ -0.246e-10■□□□□ 8.8
GPC3-201ENST00000370818 DYNC1LI2O43237 492 aaPredicted RBP13.52□□□□□ -0.24
GPC3-201ENST00000370818 PSTPIP1O43586 416 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 CALB1P05937 261 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 CDC25CP30307 473 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 RPS6KA3P51812 740 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 RAD23BP54727 409 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 KIZQ2M2Z5 673 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 DENND1BQ6P3S1 775 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 ZNF410Q86VK4 478 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.52□□□□□ -0.24
GPC3-201ENST00000370818 C1orf54Q8WWF1 131 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 RAPGEF5Q92565 580 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 ZNF570Q96NI8 536 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 TWNKQ96RR1 684 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 FMO2Q99518 471 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 TXLNGYQ9BZA5 131 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 VRTNQ9H8Y1 702 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 RASAL2Q9UJF2 1139 aa13.52□□□□□ -0.24
GPC3-201ENST00000370818 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.52□□□□□ -0.24
GPC3-201ENST00000370818 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.52□□□□□ -0.24
GPC3-201ENST00000370818 PODXLO00592 558 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 MAN1A1P33908 653 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 RPL21P46778 160 aaKnown RBP13.52□□□□□ -0.25
GPC3-201ENST00000370818 RAB27AP51159 221 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 YWHAEP62258 255 aaKnown RBP13.52□□□□□ -0.25
GPC3-201ENST00000370818 LACTBP83111 547 aaPredicted RBP13.52□□□□□ -0.25
GPC3-201ENST00000370818 TMEM62Q0P6H9 643 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 ORC1Q13415 861 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 ZC3H12AQ5D1E8 599 aaKnown RBP13.52□□□□□ -0.25
GPC3-201ENST00000370818 PPP1R15BQ5SWA1 713 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 ANKS1BQ7Z6G8 1248 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 RHOT1Q8IXI2 618 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 LENG1Q96BZ8 264 aaPredicted RBP13.52□□□□□ -0.25
GPC3-201ENST00000370818 ADAMTS10Q9H324 1103 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 HMGXB4Q9UGU5 601 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 CYTH4Q9UIA0 394 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 PTPN22Q9Y2R2 807 aa13.52□□□□□ -0.25
GPC3-201ENST00000370818 ITGBL1O95965 494 aaPredicted RBP13.51□□□□□ -0.25
GPC3-201ENST00000370818 F2P00734 622 aa13.51□□□□□ -0.25
GPC3-201ENST00000370818 TCF4P15884 667 aa13.51□□□□□ -0.25
GPC3-201ENST00000370818 POLR2BP30876 1174 aaKnown RBP13.51□□□□□ -0.25
GPC3-201ENST00000370818 HOXA11P31270 313 aaPredicted RBP13.51□□□□□ -0.25
GPC3-201ENST00000370818 HUNKP57058 714 aa13.51□□□□□ -0.25
GPC3-201ENST00000370818 OGDHQ02218 1023 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms