RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 USP49Q70CQ1 688 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 TFB1MQ8WVM0 346 aaKnown RBP8.91□□□□□ -0.98
ABCA4-201ENST00000370225 SPIRE2Q8WWL2 714 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 PGLYRP2Q96PD5 576 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 IRX2Q9BZI1 471 aaPredicted RBP8.91□□□□□ -0.98
ABCA4-201ENST00000370225 FAM96AQ9H5X1 160 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 MRPL40Q9NQ50 206 aaKnown RBP8.91□□□□□ -0.98
ABCA4-201ENST00000370225 FBXL21Q9UKT6 434 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 TSPAN3O60637 253 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 PHF2O75151 1096 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 PTK7Q13308 1070 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 PHACTR4Q8IZ21 702 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 ZNF614Q8N883 585 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 OR9Q1Q8NGQ5 310 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 GLIS2Q9BZE0 524 aaPredicted RBP8.91□□□□□ -0.98
ABCA4-201ENST00000370225 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.91□□□□□ -0.98
ABCA4-201ENST00000370225 GMNCA6NCL1 334 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 IL10P22301 178 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 KLRC2P26717 231 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 ZNF200P98182 395 aaPredicted RBP8.91□□□□□ -0.98
ABCA4-201ENST00000370225 GUCY1A3Q02108 690 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 CDC16Q13042 620 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 BFSP2Q13515 415 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 C3orf62Q6ZUJ4 267 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 SLC44A2Q8IWA5 706 aaPredicted RBP8.91□□□□□ -0.98
ABCA4-201ENST00000370225 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.91□□□□□ -0.98
ABCA4-201ENST00000370225 TRIM17Q9Y577 477 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 PCDHB12Q9Y5F1 795 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 KRT87PA6NCN2 255 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 CFAP99D6REC4 459 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 EFCAB14O75071 495 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 AKAP5P24588 427 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 KLRC1P26715 233 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 RGS4P49798 205 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 FUT11Q495W5 492 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 KCNT1Q5JUK3 1230 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 MROH9Q5TGP6 573 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 DNAJB3Q8WWF6 145 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 SEPT8Q92599 483 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 GIMAP4Q9NUV9 329 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 WWOXQ9NZC7 414 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 CAMSAP1Q5T5Y3 1602 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 ANO9A1A5B4 782 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 GYS1P13807 737 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 PHKG1Q16816 387 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 CHMP1BQ7LBR1 199 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 ERO1BQ86YB8 467 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 KCTD10Q9H3F6 313 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 ABCA6Q8N139 1617 aa8.91□□□□□ -0.98
ABCA4-201ENST00000370225 RNASEH1O60930 286 aaKnown RBP8.9□□□□□ -0.98
ABCA4-201ENST00000370225 CSF1RP07333 972 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 IMPDH2P12268 514 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 RAG1P15918 1043 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 EPHB3P54753 998 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 CYTH1Q15438 398 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 SLC18A3Q16572 532 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 RNF168Q8IYW5 571 aaPredicted RBP8.9□□□□□ -0.98
ABCA4-201ENST00000370225 CELF4Q9BZC1 486 aaKnown RBP8.9□□□□□ -0.98
ABCA4-201ENST00000370225 ETNK1Q9HBU6 452 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 GPATCH2LQ9NWQ4 482 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 CNTNAP2Q9UHC6 1331 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 GPR75-ASB3A0A0A6YYF3 556 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 AKAP10O43572 662 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 POLBP06746 335 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 CYP2C8P10632 490 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 HSPA9P38646 679 aaKnown RBP8.9□□□□□ -0.98
ABCA4-201ENST00000370225 KCNJ1P48048 391 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 OR2W6PQ8NHA6 318 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 FAM167BQ9BTA0 163 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 RNF19AQ9NV58 838 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 VPS28Q9UK41 221 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 PDS5AQ29RF7 1337 aaKnown RBP8.9□□□□□ -0.98
ABCA4-201ENST00000370225 ALDH6A1Q02252 535 aaKnown RBP8.9□□□□□ -0.98
ABCA4-201ENST00000370225 OCA2Q04671 838 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 CLEC16AQ2KHT3 1053 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 PRR23CQ6ZRP0 262 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 CYGBQ8WWM9 190 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 MAGED4Q96JG8 741 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 WDR24Q96S15 920 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.9□□□□□ -0.98
ABCA4-201ENST00000370225 AIM2O14862 343 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 TBX3O15119 743 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 SRP72O76094 671 aaKnown RBP8.9□□□□□ -0.98
ABCA4-201ENST00000370225 PTGER2P43116 358 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 PLA2G4AP47712 749 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 ANTXR2P58335 489 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 POU4F1Q01851 419 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 TRIM28Q13263 835 aaKnown RBP8.9□□□□□ -0.98
ABCA4-201ENST00000370225 E2F4Q16254 413 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 NLRP14Q86W24 1093 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 SPATA4Q8NEY3 305 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 CCSER1Q9C0I3 900 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 MTFR1LQ9H019 292 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 MKL2Q9ULH7 1088 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 UBQLN1Q9UMX0 589 aaKnown RBP8.9□□□□□ -0.98
ABCA4-201ENST00000370225 CDYLQ9Y232 598 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 CNTNAP4Q9C0A0 1308 aa8.9□□□□□ -0.98
ABCA4-201ENST00000370225 SLC12A8A0AV02 714 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 CBX4O00257 560 aa8.9□□□□□ -0.99
ABCA4-201ENST00000370225 NFIBO00712 420 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms