RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PDCLQ13371 301 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 ITIH4Q14624 930 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 SMAD2Q15796 467 aaKnown RBP7.31□□□□□ -1.24
CSDE1-204ENST00000369530 CALCRLQ16602 461 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 LONRF3Q496Y0 759 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 SPECC1LQ69YQ0 1117 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 C3orf62Q6ZUJ4 267 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 MLKLQ8NB16 471 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 ZNF507Q8TCN5 953 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 VOPP1Q96AW1 172 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 RNPC3Q96LT9 517 aaKnown RBP7.31□□□□□ -1.24
CSDE1-204ENST00000369530 SCLT1Q96NL6 688 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 ASB2Q96Q27 587 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 DDX23Q9BUQ8 820 aaKnown RBP7.31□□□□□ -1.24
CSDE1-204ENST00000369530 COL25A1Q9BXS0 654 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-204ENST00000369530 OSBPL1AQ9BXW6 950 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 OXCT2Q9BYC2 517 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-204ENST00000369530 CSRNP2Q9H175 543 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 IL37Q9NZH6 218 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 LRRD1A4D1F6 860 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 GFRA2O00451 464 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 ACKR2O00590 384 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 PMM2O15305 246 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 RHOXF2BP0C7M4 288 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 UBA7P41226 1012 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 STX17P56962 302 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 UBASH3AP57075 661 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 ERVFC1P60507 584 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 MYL5Q02045 173 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 CACTIN-AS1Q8N1I8 211 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 DEFB123Q8N688 67 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 KIFAP3Q92845 792 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 FAM136AQ96C01 138 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 FAM81BQ96LP2 452 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 RHOXF2Q9BQY4 288 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 BHMT2Q9H2M3 363 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 NRDE2Q9H7Z3 1164 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 MLXIPQ9HAP2 919 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 SPC25Q9HBM1 224 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 HSFX1Q9UBD0 423 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 ARHGEF37A1IGU5 675 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 SMAPO00193 183 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 GRM6O15303 877 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 SMIM24O75264 130 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 TMCC1O94876 653 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 FAM200BP0CF97 657 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 RAG1P15918 1043 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 ACADSP16219 412 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 ZFXP17010 805 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-204ENST00000369530 IRS1P35568 1242 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 THPOP40225 353 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 GRM5P41594 1212 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 SCNN1BP51168 640 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 DSG1Q02413 1049 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 CUL4BQ13620 913 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 EXOC3L1Q86VI1 746 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 STKLD1Q8NE28 680 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 AGAP11Q8TF27 550 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.31□□□□□ -1.241e-7■■■■□ 24.2
CSDE1-204ENST00000369530 EPSTI1Q96J88 318 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 PRDM6Q9NQX0 595 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 TUBA8Q9NY65 449 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-204ENST00000369530 COL4A3BPQ9Y5P4 624 aa7.31□□□□□ -1.24
CSDE1-204ENST00000369530 BZW2Q9Y6E2 419 aaKnown RBP7.31□□□□□ -1.24
CSDE1-204ENST00000369530 COL5A1P20908 1838 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 F8W810 466 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 SSBP05455 408 aaKnown RBP eCLIP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 ATP6V1C1P21283 382 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 SESN3P58005 492 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 RTL10Q7L3V2 364 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 TAS1R1Q7RTX1 841 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 ZNF280BQ86YH2 543 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 SLC9A9Q8IVB4 645 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 TMEM130Q8N3G9 435 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 ZSWIM2Q8NEG5 633 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 BHMTQ93088 406 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 PPP1R12CQ9BZL4 782 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 DLGAP2Q9P1A6 1054 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 KIAA1522Q9P206 1035 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 IPPQ9Y573 584 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 PCDHA5Q9Y5H7 936 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 CFAP47Q6ZTR5 3102 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 A0A087WZ62 844 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 N4BP3O15049 544 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 GALTP07902 379 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 CYP3A5P20815 502 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 CASP1P29466 404 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 NPTX2P47972 431 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 HDAC4P56524 1084 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 PSMC1P62191 440 aaKnown RBP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 IKBKEQ14164 716 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 PTPN21Q16825 1174 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 ANKRD20A2Q5SQ80 823 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 ANKRD20A1Q5TYW2 823 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 ANKRD20A3Q5VUR7 823 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 PDE12Q6L8Q7 609 aaKnown RBP7.3□□□□□ -1.24
CSDE1-204ENST00000369530 LRIG3Q6UXM1 1119 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 ZPBP2Q6X784 338 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 ARHGAP18Q8N392 663 aa7.3□□□□□ -1.24
CSDE1-204ENST00000369530 RBBP8NLQ8NC74 664 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms