RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 CARSP49589 748 aaKnown RBP13.46□□□□□ -0.26
PTPRK-207ENST00000368226 MTHFD1LQ6UB35 978 aa13.46□□□□□ -0.26
PTPRK-207ENST00000368226 SLC16A10Q8TF71 515 aa13.46□□□□□ -0.26
PTPRK-207ENST00000368226 NRBF2Q96F24 287 aa13.46□□□□□ -0.26
PTPRK-207ENST00000368226 NAF1Q96HR8 494 aaKnown RBP13.46□□□□□ -0.26
PTPRK-207ENST00000368226 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.46□□□□□ -0.26
PTPRK-207ENST00000368226 KRT4P19013 534 aa13.46□□□□□ -0.26
PTPRK-207ENST00000368226 PDK1Q15118 436 aa13.46□□□□□ -0.26
PTPRK-207ENST00000368226 ARHGAP15Q53QZ3 475 aa13.46□□□□□ -0.26
PTPRK-207ENST00000368226 ANKS3Q6ZW76 656 aa13.46□□□□□ -0.26
PTPRK-207ENST00000368226 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.46□□□□□ -0.26
PTPRK-207ENST00000368226 DNAJB3Q8WWF6 145 aa13.46□□□□□ -0.26
PTPRK-207ENST00000368226 SNTG2Q9NY99 539 aa13.46□□□□□ -0.26
PTPRK-207ENST00000368226 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-207ENST00000368226 SSU72P8A0A1W2PR75 194 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 CXCL8P10145 99 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 PSMC6P62333 389 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 EFEMP1Q12805 493 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 CTXN3Q4LDR2 81 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 SDE2Q6IQ49 451 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 MPZL3Q6UWV2 235 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 DACH2Q96NX9 599 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 COLEC11Q9BWP8 271 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 KDM4CQ9H3R0 1056 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 DAB2P98082 770 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 PLIN5Q00G26 463 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 DTX3LQ8TDB6 740 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 SCFD1Q8WVM8 642 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 TSSK1BQ9BXA7 367 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 AGO4Q9HCK5 861 aaKnown RBP13.45□□□□□ -0.26
PTPRK-207ENST00000368226 WTIPA6NIX2 430 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-207ENST00000368226 DCDC2CA8MYV0 355 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 RHOBTB1O94844 696 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 MYL2P10916 166 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 EPB42P16452 691 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 MZF1P28698 734 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-207ENST00000368226 GIT2Q14161 759 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 LAYNQ6UX15 382 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 ST13P4Q8IZP2 240 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-207ENST00000368226 NEUROG2Q9H2A3 272 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 FAM96AQ9H5X1 160 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-207ENST00000368226 TOB1P50616 345 aaPredicted RBP13.45□□□□□ -0.26
PTPRK-207ENST00000368226 CEP70Q8NHQ1 597 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 TFB1MQ8WVM0 346 aaKnown RBP13.45□□□□□ -0.26
PTPRK-207ENST00000368226 APOL2Q9BQE5 337 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 RSAD1Q9HA92 442 aa13.45□□□□□ -0.26
PTPRK-207ENST00000368226 TMEM253P0C7T8 217 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 TERF2Q15554 542 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 SRPK1Q96SB4 655 aaKnown RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 PSMC3IPQ9P2W1 217 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 MYO1GB0I1T2 1018 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 OGTO15294 1046 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 SOAT1P35610 550 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 MAGEA4P43358 317 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 ACAD10Q6JQN1 1059 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 ZFPM1Q8IX07 1006 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 ICA1LQ8NDH6 482 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 MAP3K14Q99558 947 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 CRLS1Q9UJA2 301 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 PNMA8BQ9ULN7 279 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 DUSP10Q9Y6W6 482 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 CKMP06732 381 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 PTGER2P43116 358 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 STX3Q13277 289 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 EMC1Q8N766 993 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 TMX2Q9Y320 296 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 DNAJC8O75937 253 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 ITIH2P19823 946 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 ACAT1P24752 427 aaKnown RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 ZNF177Q13360 481 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 SPATA21Q7Z572 469 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 PGLYRP2Q96PD5 576 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 SPATC1LQ9H0A9 340 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 NOP53Q9NZM5 478 aaKnown RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 ASS1P00966 412 aaKnown RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 SREBF1P36956 1147 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 MYL6P60660 151 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 TRIM65Q6PJ69 517 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 SLC47A2Q86VL8 602 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 DAGLBQ8NCG7 672 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 SYTL5Q8TDW5 730 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 TRIM45Q9H8W5 580 aaPredicted RBP13.44□□□□□ -0.26
PTPRK-207ENST00000368226 PAK5Q9P286 719 aa13.44□□□□□ -0.26
PTPRK-207ENST00000368226 POLBP06746 335 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 PNPLA4P41247 253 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 BLVRAP53004 296 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 AP2B1P63010 937 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 SEMA3FQ13275 785 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 PGM5Q15124 567 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 DDX4Q9NQI0 724 aaKnown RBP13.43□□□□□ -0.26
PTPRK-207ENST00000368226 ITSN1Q15811 1721 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 PXDNQ92626 1479 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 ATP6V1E1P36543 226 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 NAMPTP43490 491 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 TGFB2P61812 414 aa13.43□□□□□ -0.26
PTPRK-207ENST00000368226 LAMTOR4Q0VGL1 99 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms