RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 EFCAB14O75071 495 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 ESRRBO95718 433 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 LRRC8EQ6NSJ5 796 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 C4orf19Q8IY42 314 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 CEP70Q8NHQ1 597 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 CUL3Q13618 768 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 KRT33BQ14525 404 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 ANGPTL8Q6UXH0 198 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 VPS37AQ8NEZ2 397 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 AAR2Q9Y312 384 aaKnown RBP12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 FAM200BP0CF97 657 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 GIT2Q14161 759 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 DNERQ8NFT8 737 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 JADE3Q92613 823 aa12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 CDK5RAP1Q96SZ6 601 aaKnown RBP12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 PIN4Q9Y237 131 aaKnown RBP12.54□□□□□ -0.4
CDC42BPA-203ENST00000366766 TBC1D4O60343 1298 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 CPT1AP50416 773 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 PATL1Q86TB9 770 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 PHF20L1A8MW92 1017 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 CLASP2O75122 1294 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 NAB1Q13506 487 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 SLC30A9Q6PML9 568 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 PNKPQ96T60 521 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 RBBP8Q99708 897 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 TMBIM4Q9HC24 238 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 PCDH9Q9HC56 1237 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 ANLNQ9NQW6 1124 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 LSM7Q9UK45 103 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 GLRA3O75311 464 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 KDSRQ06136 332 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 DCP1BQ8IZD4 617 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 KCNQ5Q9NR82 932 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 CRYMQ14894 314 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 DDI1Q8WTU0 396 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 SPIRE2Q8WWL2 714 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 FAM163AQ96GL9 167 aaPredicted RBP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 SOX13Q9UN79 622 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 SNX9Q9Y5X1 595 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 BCAT1P54687 386 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 RPS6P62753 249 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 TBX2Q13207 712 aaPredicted RBP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 WDR49Q8IV35 697 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 OR6J1Q8NGC5 347 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 TCRBV5S4A2TA0A5A2 114 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 SLC37A4O43826 429 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 SNUPNO95149 360 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 PCBP1Q15365 356 aaKnown RBP eCLIP12.53□□□□□ -0.43e-16■■■■■ 75.2
CDC42BPA-203ENST00000366766 AGAP9Q5VTM2 703 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 CGRRF1Q99675 332 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 MMADHCQ9H3L0 296 aaPredicted RBP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 TRIM10Q9UDY6 481 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 TUBGCP4Q9UGJ1 667 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 ADGRA3Q8IWK6 1321 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 NSUN2Q08J23 767 aaKnown RBP eCLIP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 PDAP1Q13442 181 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 LVRNQ6Q4G3 990 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 EPC1Q9H2F5 836 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 CYP4F11Q9HBI6 524 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 ABCF3Q9NUQ8 709 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 TBC1D23Q9NUY8 699 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 NDUFS3O75489 264 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 MYL6P60660 151 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 CASKIN2Q8WXE0 1202 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 NMRK1Q9NWW6 199 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 UBQLN1Q9UMX0 589 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 KCNH4Q9UQ05 1017 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 FRMPD4Q14CM0 1322 aa12.53□□□□□ -0.4
CDC42BPA-203ENST00000366766 TGM2P21980 687 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 ETFBP38117 255 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 CTCFP49711 727 aaPredicted RBP12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 LONP2Q86WA8 852 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 STX19Q8N4C7 294 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 TMEM143Q96AN5 459 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 MROH8Q9H579 483 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 OLA1Q9NTK5 396 aaKnown RBP12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 AP4S1Q9Y587 144 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 BTNL10A8MVZ5 291 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 ALDH18A1P54886 795 aaKnown RBP12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 ZC2HC1CQ53FD0 456 aaPredicted RBP12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 DCUN1D1Q96GG9 259 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 MMTAG2Q9BU76 263 aaKnown RBP12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 RXFP1Q9HBX9 757 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 ENO1P06733 434 aaKnown RBP12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 WEE2P0C1S8 567 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 FCGR1AP12314 374 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 SESN2P58004 480 aaPredicted RBP12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 DSG1Q02413 1049 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 TIGD7Q6NT04 549 aaPredicted RBP12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 RMDN1Q96DB5 314 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 C9orf72Q96LT7 481 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 RUSC1Q9BVN2 902 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 MAGED2Q9UNF1 606 aaPredicted RBP12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 BCL9O00512 1426 aa12.52□□□□□ -0.4
CDC42BPA-203ENST00000366766 CCDC78A2IDD5 438 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 LCP1P13796 627 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 PTGER2P43116 358 aa12.52□□□□□ -0.41
CDC42BPA-203ENST00000366766 DRG1Q9Y295 367 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms