RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 PSMB9P28065 219 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 GSTT1P30711 240 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 ALDH5A1P51649 535 aaPredicted RBP13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 NDUFA5Q16718 116 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 C12orf60Q5U649 245 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 USP33Q8TEY7 942 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 PHF20Q9BVI0 1012 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 UBAP1LF5GYI3 381 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 HIST1H2AGP0C0S8 130 aaPredicted RBP13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 HIST1H2ADP20671 130 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 EPHB2P29323 1055 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 EDRF1Q3B7T1 1238 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 KLHDC7AQ5VTJ3 777 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 TAF2Q6P1X5 1199 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 TMPRSS6Q8IU80 811 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 SGF29Q96ES7 293 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 HIST1H2AHQ96KK5 128 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 HIST1H2AJQ99878 128 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 H2AFJQ9BTM1 129 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 GABBR1Q9UBS5 961 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 KLHL20Q9Y2M5 609 aa13.95□□□□□ -0.18
CCDC144A-203ENST00000360495 MYMKA6NI61 221 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 SASH3O75995 380 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 PSMC5P62195 406 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 PSMC6P62333 389 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 FAM98CQ17RN3 349 aaKnown RBP13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 DEFB107AQ8IZN7 70 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 RDM1Q8NG50 284 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 ZNF669Q96BR6 464 aaPredicted RBP13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 RSAD1Q9HA92 442 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 KDM5CP41229 1560 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 PHGDHO43175 533 aaKnown RBP13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 B3GNT6Q6ZMB0 384 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 ENGASEQ8NFI3 743 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 C6orf62Q9GZU0 229 aaPredicted RBP13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 SPRTNQ9H040 489 aaPredicted RBP13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 C2orf40Q9H1Z8 148 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 CLEC4MQ9H2X3 399 aaPredicted RBP13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 CACNA2D2Q9NY47 1150 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 CHORDC1Q9UHD1 332 aaPredicted RBP13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 ASAP1Q9ULH1 1129 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 ERVK-7P63135 1459 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 MED26O95402 600 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 ATP6V1B2P21281 511 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 SLC44A5Q8NCS7 719 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 FRMD8Q9BZ67 464 aaPredicted RBP13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 WHRNQ9P202 907 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 PKP3Q9Y446 797 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 NDUFS3O75489 264 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 RGS2P41220 211 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 CDK17Q00537 523 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 NEDD8Q15843 81 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 RC3H1Q5TC82 1133 aaKnown RBP13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 PCNX4Q63HM2 1172 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 ANKS3Q6ZW76 656 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 FOXP4Q8IVH2 680 aaPredicted RBP13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 FBXO25Q8TCJ0 367 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 CAPSLQ8WWF8 208 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 ZNF184Q99676 751 aaPredicted RBP13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 PLAGL2Q9UPG8 496 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 MYRFQ9Y2G1 1151 aa13.94□□□□□ -0.18
CCDC144A-203ENST00000360495 BGNP21810 368 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 PTPN7P35236 360 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 SERPINH1P50454 418 aaKnown RBP13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 BFSP2Q13515 415 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 PDPK2PQ6A1A2 396 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 SIX5Q8N196 739 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 E9PBE3 544 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 KLHL41O60662 606 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 TRIM13O60858 407 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 CNOT3O75175 753 aaKnown RBP13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 H2AFYO75367 372 aaKnown RBP13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 GH2P01242 217 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 GLI1P08151 1106 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 HSMCR30P0CW71 290 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 SLC9A5Q14940 896 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 SMTNL2Q2TAL5 461 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 ARMC3Q5W041 872 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 SWSAP1Q6NVH7 229 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 C11orf74Q86VG3 221 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 LRRN4CLQ8ND94 238 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 STKLD1Q8NE28 680 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 FBXO36Q8NEA4 188 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 SMAD5Q99717 465 aaKnown RBP13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 DBNDD1Q9H9R9 158 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 DCP1AQ9NPI6 582 aaPredicted RBP13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 CTNNAL1Q9UBT7 734 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 RAB21Q9UL25 225 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 FCGR1AP12314 374 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 GANCQ8TET4 914 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 REEP2Q9BRK0 252 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 THAP2Q9H0W7 228 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 ZNF302Q9NR11 478 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 SELENONQ9NZV5 590 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 HPS5Q9UPZ3 1129 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 MROH7Q68CQ1 1323 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 STX7O15400 261 aaKnown RBP13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 RAG1P15918 1043 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms