RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 LRMDAQ9H2I8 198 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 RANBP17Q9H2T7 1088 aaKnown RBP10.48□□□□□ -0.73
RNF40-202ENST00000357890 ZDHHC18Q9NUE0 388 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 PCYOX1Q9UHG3 505 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 APPL1Q9UKG1 709 aa10.48□□□□□ -0.73
RNF40-202ENST00000357890 XPO1O14980 1071 aaKnown RBP10.47□□□□□ -0.73
RNF40-202ENST00000357890 TPD52L2O43399 206 aaKnown RBP10.47□□□□□ -0.73
RNF40-202ENST00000357890 LYNP07948 512 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 RTP1P59025 263 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 PKN2Q16513 984 aaKnown RBP10.47□□□□□ -0.73
RNF40-202ENST00000357890 RNF43Q68DV7 783 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 PYDC1Q8WXC3 89 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 PCDHB18PQ96TA0 734 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 RMDN3Q96TC7 470 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 BTBD10Q9BSF8 475 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 DMAC2Q9NW81 257 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.47□□□□□ -0.73
RNF40-202ENST00000357890 RPTORQ8N122 1335 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 LOC100653049A0A140TA62 436 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 SPDYE2BA6NHP3 402 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 MAP3K13O43283 966 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 KRT34O76011 436 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 SPDYE6P0CI01 402 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 TAC1P20366 129 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 PHBP35232 272 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 RARRES1P49788 294 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 NEK3P51956 506 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 SNRPFP62306 86 aaKnown RBP10.47□□□□□ -0.73
RNF40-202ENST00000357890 KRT76Q01546 638 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 CAV1Q03135 178 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 ZDHHC24Q6UX98 284 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 TRIM67Q6ZTA4 783 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 RHOT1Q8IXI2 618 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 ATP6V0A1Q93050 837 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 TRIM11Q96F44 468 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 FAM81BQ96LP2 452 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 OSBPL8Q9BZF1 889 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 FAM192AQ9GZU8 254 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 C12orf65Q9H3J6 166 aaKnown RBP10.47□□□□□ -0.73
RNF40-202ENST00000357890 TSC22D4Q9Y3Q8 395 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 PCDHA3Q9Y5H8 950 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 MEI4A8MW99 385 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 LPXNO60711 386 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 MAPTP10636 758 aaKnown RBP10.47□□□□□ -0.73
RNF40-202ENST00000357890 FOXN2P32314 431 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 RPA3P35244 121 aaPredicted RBP10.47□□□□□ -0.73
RNF40-202ENST00000357890 LMNB2Q03252 620 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 EMC10Q5UCC4 262 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 RSAD2Q8WXG1 361 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 BORCS6Q96GS4 357 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 CNBD2Q96M20 576 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 TRIM56Q9BRZ2 755 aaKnown RBP10.47□□□□□ -0.73
RNF40-202ENST00000357890 GRHL1Q9NZI5 618 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 C10orf71Q711Q0 1435 aa10.47□□□□□ -0.73
RNF40-202ENST00000357890 ICAM1P05362 532 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 MYL2P10916 166 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 SFNP31947 248 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 ACOT2P49753 483 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 ARSEP51690 589 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 SOX10P56693 466 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 SLC5A9Q2M3M2 681 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 TKFCQ3LXA3 575 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 MTERF2Q49AM1 385 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 ACAD10Q6JQN1 1059 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 RSBN1LQ6PCB5 846 aaPredicted RBP10.46□□□□□ -0.73
RNF40-202ENST00000357890 NIM1KQ8IY84 436 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 DEPTORQ8TB45 409 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 INPP5DQ92835 1189 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 ERLEC1Q96DZ1 483 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 ZNF333Q96JL9 665 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 CLPTM1LQ96KA5 538 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 NINJ2Q9NZG7 142 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 TDRKHQ9Y2W6 561 aaKnown RBP10.46□□□□□ -0.73
RNF40-202ENST00000357890 LRRC42Q9Y546 428 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 KRT10P13645 584 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 VAV1P15498 845 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 ADRA1DP25100 572 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 BASP1P80723 227 aaKnown RBP10.46□□□□□ -0.73
RNF40-202ENST00000357890 HIC1Q14526 733 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 CNGA3Q16281 694 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 PARP6Q2NL67 630 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 LIN52Q52LA3 116 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 SPDYCQ5MJ68 293 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 C4orf50Q6ZRC1 276 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 MARK2Q7KZI7 788 aaKnown RBP10.46□□□□□ -0.73
RNF40-202ENST00000357890 CYP4X1Q8N118 509 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 ZSWIM2Q8NEG5 633 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 ACAP3Q96P50 834 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 TUBGCP5Q96RT8 1024 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 GRIP2Q9C0E4 1043 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 TMEM39BQ9GZU3 492 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 ASCC2Q9H1I8 757 aaPredicted RBP10.46□□□□□ -0.73
RNF40-202ENST00000357890 TSPYL2Q9H2G4 693 aaPredicted RBP10.46□□□□□ -0.73
RNF40-202ENST00000357890 ARL8BQ9NVJ2 186 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 LNPEPQ9UIQ6 1025 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 USP20Q9Y2K6 914 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 NEU2Q9Y3R4 380 aa10.46□□□□□ -0.73
RNF40-202ENST00000357890 ZMYM2Q9UBW7 1377 aa10.46□□□□□ -0.74
RNF40-202ENST00000357890 H0YCG3 227 aa10.46□□□□□ -0.74
RNF40-202ENST00000357890 TBX10O75333 385 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms