RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TAS2R14Q9NYV8 317 aa4.3□□□□□ -1.72
LIG4-201ENST00000356922 ARHGAP20Q9P2F6 1191 aa4.3□□□□□ -1.72
LIG4-201ENST00000356922 CAPN11Q9UMQ6 739 aa4.3□□□□□ -1.72
LIG4-201ENST00000356922 ZNF263O14978 683 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 TACC1O75410 805 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 RFPL2O75678 378 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 CTSAP10619 480 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 EPCAMP16422 314 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 ROR1Q01973 937 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 USP41Q3LFD5 358 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 SV2CQ496J9 727 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 SLC39A12Q504Y0 691 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 MDH1BQ5I0G3 518 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 WDR44Q5JSH3 913 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 FKBP15Q5T1M5 1219 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 TAF3Q5VWG9 929 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 FAM171BQ6P995 826 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 GPRIN1Q7Z2K8 1008 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 ZNF571Q7Z3V5 609 aaPredicted RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 TTC30AQ86WT1 665 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 C12orf76Q8N812 135 aaPredicted RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 ST13P5Q8NFI4 369 aaPredicted RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 UBA3Q8TBC4 463 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 MICAL1Q8TDZ2 1067 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 GUCD1Q96NT3 240 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 STK33Q9BYT3 514 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 ZNF518BQ9C0D4 1074 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 MSRAQ9UJ68 235 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 NOCTQ9UK39 431 aaKnown RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 BARX2Q9UMQ3 279 aaPredicted RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 PCDHB8Q9UN66 801 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 PCDHB4Q9Y5E5 795 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 FSCN2O14926 492 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 TGM5O43548 720 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 STX10O60499 249 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 MMEP08473 750 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 PTPN1P18031 435 aaKnown RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 WARSP23381 471 aaKnown RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 KRT9P35527 623 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 NDUFV1P49821 464 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 TNNC1P63316 161 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 PTK2Q05397 1052 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 DUSP4Q13115 394 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 MTMR3Q13615 1198 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 KCNC3Q14003 757 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 DDR2Q16832 855 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 CTXN3Q4LDR2 81 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 ZNF697Q5TEC3 545 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 SLC8B1Q6J4K2 584 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 LILRA6Q6PI73 481 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 PHLDB2Q86SQ0 1253 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 USP37Q86T82 979 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 PASD1Q8IV76 773 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 CRYBG2Q8N1P7 616 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 TOP6BLQ8N6T0 577 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 RBBP8NLQ8NC74 664 aaPredicted RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 B3GALNT2Q8NCR0 500 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 NEK11Q8NG66 645 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 SLC2A14Q8TDB8 520 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 ZNF606Q8WXB4 792 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 PIK3R5Q8WYR1 880 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 TMEM176AQ96HP8 235 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 PIWIL1Q96J94 861 aaKnown RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 PDLIM2Q96JY6 352 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 TSPAN18Q96SJ8 248 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 TLR9Q9NR96 1032 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 BPTFQ12830 3046 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 PLXNA3P51805 1871 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 XPOTO43592 962 aaKnown RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 ABLIM3O94929 683 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 GLP2RO95838 553 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 KRT5P13647 590 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 CYP11B1P15538 503 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 BDNFP23560 247 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 PNPLA4P41247 253 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 MRE11P49959 708 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 USP46P62068 366 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 ADCY1Q08828 1119 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 PSMD5Q16401 504 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 FILIP1LQ4L180 1135 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 DENND1BQ6P3S1 775 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 PDXDC1Q6P996 788 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 CCDC186Q7Z3E2 898 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 SCAMP5Q8TAC9 235 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 EPS8L1Q8TE68 723 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 CYFIP2Q96F07 1278 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 HEXIM2Q96MH2 286 aaKnown RBP4.29□□□□□ -1.72
LIG4-201ENST00000356922 ZNF560Q96MR9 790 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 KLHL5Q96PQ7 755 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 SMOQ99835 787 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 ZCWPW1Q9H0M4 648 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 KCNF1Q9H3M0 494 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 HAUS4Q9H6D7 363 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 CEP72Q9P209 647 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 MTRRQ9UBK8 725 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 MTCH2Q9Y6C9 303 aa4.29□□□□□ -1.72
LIG4-201ENST00000356922 N4BP1O75113 896 aaKnown RBP4.28□□□□□ -1.72
LIG4-201ENST00000356922 ODC1P11926 461 aa4.28□□□□□ -1.72
LIG4-201ENST00000356922 ATF6P18850 670 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms