RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 KIAA1257Q9ULG3 409 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 CNTN6Q9UQ52 1028 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 NME7Q9Y5B8 376 aa16.56■□□□□ 0.24
TRIM13-201ENST00000356017 TSC2P49815 1807 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 MYBPHLA2RUH7 354 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 HCRTO43612 131 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 ATP2C2O75185 946 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 PAEPP09466 180 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 KLK7P49862 253 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 ADCY1Q08828 1119 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 RAPGEF1Q13905 1077 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 KCNC3Q14003 757 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 ARHGAP44Q17R89 818 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 ZNF394Q53GI3 561 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 IQCEQ6IPM2 695 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 CCDC149Q6ZUS6 474 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 SPATA2LQ8IUW3 424 aaPredicted RBP16.55■□□□□ 0.24
TRIM13-201ENST00000356017 KREMEN2Q8NCW0 462 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 SHC3Q92529 594 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 IQCDQ96DY2 449 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 HEXIM2Q96MH2 286 aaKnown RBP16.55■□□□□ 0.24
TRIM13-201ENST00000356017 NUP58Q9BVL2 599 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 NAA15Q9BXJ9 866 aaKnown RBP16.55■□□□□ 0.24
TRIM13-201ENST00000356017 TRIM5Q9C035 493 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 GANQ9H2C0 597 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 DPEP3Q9H4B8 488 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 ABCB6Q9NP58 842 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 CRTAC1Q9NQ79 661 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 HMGXB4Q9UGU5 601 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 FBXW11Q9UKB1 542 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 PCDHB5Q9Y5E4 795 aa16.55■□□□□ 0.24
TRIM13-201ENST00000356017 MTMR11A4FU01 709 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 PRRG1O14668 218 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 NOL4O94818 638 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 KRT5P13647 590 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 TUFMP49411 452 aaKnown RBP16.54■□□□□ 0.24
TRIM13-201ENST00000356017 RAD23BP54727 409 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 POLR2FP61218 127 aaKnown RBP16.54■□□□□ 0.24
TRIM13-201ENST00000356017 ADAM15Q13444 863 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 CFAP221Q4G0U5 840 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 MDH1BQ5I0G3 518 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 LIN9Q5TKA1 542 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 CACNA2D4Q7Z3S7 1137 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 TCEAL8Q8IYN2 117 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 PCED1BQ96HM7 432 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 PGLYRP2Q96PD5 576 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 SPAG5Q96R06 1193 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 TWNKQ96RR1 684 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 ELOVL4Q9GZR5 314 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 CYP4F11Q9HBI6 524 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 DZANK1Q9NVP4 752 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 FHOD1Q9Y613 1164 aa16.54■□□□□ 0.24
TRIM13-201ENST00000356017 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 EPCAMP16422 314 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 GTF2F1P35269 517 aaKnown RBP eCLIP16.53■□□□□ 0.244e-7■■□□□ 11.9
TRIM13-201ENST00000356017 PBX1P40424 430 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 USP8P40818 1118 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 DRAP1Q14919 205 aaPredicted RBP16.53■□□□□ 0.24
TRIM13-201ENST00000356017 COL19A1Q14993 1142 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 CTC1Q2NKJ3 1217 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 LLGL2Q6P1M3 1020 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 FMNL3Q8IVF7 1028 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 SLC4A11Q8NBS3 891 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 ATAD1Q8NBU5 361 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 RBBP8NLQ8NC74 664 aaPredicted RBP16.53■□□□□ 0.24
TRIM13-201ENST00000356017 PABPC5Q96DU9 382 aaKnown RBP16.53■□□□□ 0.24
TRIM13-201ENST00000356017 MAN1C1Q9NR34 630 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 TMLHEQ9NVH6 421 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 ABI2Q9NYB9 513 aaPredicted RBP16.53■□□□□ 0.24
TRIM13-201ENST00000356017 CEP72Q9P209 647 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 ATP8B3O60423 1300 aa16.53■□□□□ 0.24
TRIM13-201ENST00000356017 SPATA31D3P0C874 917 aa16.52■□□□□ 0.24
TRIM13-201ENST00000356017 CYP27A1Q02318 531 aa16.52■□□□□ 0.24
TRIM13-201ENST00000356017 DUSP4Q13115 394 aa16.52■□□□□ 0.24
TRIM13-201ENST00000356017 ORC1Q13415 861 aa16.52■□□□□ 0.24
TRIM13-201ENST00000356017 CCDC85BQ15834 202 aaPredicted RBP16.52■□□□□ 0.24
TRIM13-201ENST00000356017 FIGNQ5HY92 759 aa16.52■□□□□ 0.24
TRIM13-201ENST00000356017 SPATA31D4Q6ZUB0 917 aa16.52■□□□□ 0.24
TRIM13-201ENST00000356017 MYLPFQ96A32 169 aa16.52■□□□□ 0.24
TRIM13-201ENST00000356017 EDEM3Q9BZQ6 932 aa16.52■□□□□ 0.24
TRIM13-201ENST00000356017 NLRC4Q9NPP4 1024 aa16.52■□□□□ 0.24
TRIM13-201ENST00000356017 CLDND1Q9NY35 253 aa16.52■□□□□ 0.24
TRIM13-201ENST00000356017 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.52■□□□□ 0.24
TRIM13-201ENST00000356017 ITIH6Q6UXX5 1313 aa16.52■□□□□ 0.24
TRIM13-201ENST00000356017 F8VZ95 297 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 FOXN3O00409 490 aaPredicted RBP16.52■□□□□ 0.23
TRIM13-201ENST00000356017 EPHB6O15197 1021 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 C8AP07357 584 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 VDRP11473 427 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 HOXB8P17481 243 aaPredicted RBP16.52■□□□□ 0.23
TRIM13-201ENST00000356017 HOXA9P31269 272 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 ZNF132P52740 706 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 BPIFB4P59827 614 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 PTK2Q05397 1052 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 STILQ15468 1287 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 SKIV2LQ15477 1246 aaKnown RBP16.52■□□□□ 0.23
TRIM13-201ENST00000356017 SGO2Q562F6 1265 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 VSTM1Q6UX27 236 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 FAM71AQ8IYT1 594 aa16.52■□□□□ 0.23
TRIM13-201ENST00000356017 C12orf29Q8N999 325 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms