RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 P3H1Q32P28 736 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 GSDMBQ8TAX9 411 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 PAK5Q9P286 719 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 UMODL1Q5DID0 1318 aa12.76□□□□□ -0.37
SMAD9-201ENST00000350148 ZNF185O15231 689 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 TOMM70O94826 608 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 SLC2A3P11169 496 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 GRIK1P39086 918 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 TMED2Q15363 201 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 ZCWPW2Q504Y3 356 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 MCOLN2Q8IZK6 566 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 TSC22D3Q99576 134 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 ERP44Q9BS26 406 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 SMIM35A0A1B0GVV1 85 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 DCDC2CA8MYV0 355 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 SOX10P56693 466 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 TMED1Q13445 227 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 ARHGEF19Q8IW93 802 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 SRRM1Q8IYB3 904 aaKnown RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 SEZ6LQ9BYH1 1024 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 RBM12Q9NTZ6 932 aaKnown RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 COL20A1Q9P218 1284 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 NOVA2Q9UNW9 492 aaKnown RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 HEY1Q9Y5J3 304 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 GMNNO75496 209 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 TPI1P60174 286 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 POU5F1BQ06416 359 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 KCNMA1Q12791 1236 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 LAMB3Q13751 1172 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 UGCGQ16739 394 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 SLC35G1Q2M3R5 365 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 JAMLQ86YT9 394 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 ADGRF2Q8IZF7 708 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 TMEM86AQ8N2M4 240 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 UHMK1Q8TAS1 419 aaKnown RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 BAP1Q92560 729 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 OSMRQ99650 979 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 CNPY3Q9BT09 278 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 LACRTQ9GZZ8 138 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 BTBD7Q9P203 1132 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 HPCAL4Q9UM19 191 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 PMM2O15305 246 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 ZBTB24O43167 697 aaPredicted RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 BST2Q10589 180 aaKnown RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 CBWD6Q4V339 395 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 CBWD3Q5JTY5 395 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 CBWD5Q5RIA9 395 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 CPB2Q96IY4 423 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 UROC1Q96N76 676 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 POP1Q99575 1024 aaKnown RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 DHX33Q9H6R0 707 aaKnown RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 HMGCRP04035 888 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 STMN1P16949 149 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 STIP1P31948 543 aaKnown RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 ARL2P36404 184 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 COILP38432 576 aaPredicted RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 BYSLQ13895 437 aaKnown RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 PDK1Q15118 436 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 FBXW10Q5XX13 1052 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 FAM71AQ8IYT1 594 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 C1orf54Q8WWF1 131 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 TEPSINQ96N21 525 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 TUBB6Q9BUF5 446 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 ROPN1BQ9BZX4 212 aaPredicted RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 CXorf56Q9H5V9 222 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 ROPN1Q9HAT0 212 aaPredicted RBP12.75□□□□□ -0.37
SMAD9-201ENST00000350148 STARD7Q9NQZ5 370 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 AAASQ9NRG9 546 aa12.75□□□□□ -0.37
SMAD9-201ENST00000350148 ARSEP51690 589 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 POLE2P56282 527 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 DEUP1Q05D60 604 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 MUM1Q2TAK8 710 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 MGARPQ8TDB4 240 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 LENG9Q96B70 501 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 TBCBQ99426 244 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 NTPCRQ9BSD7 190 aaKnown RBP12.74□□□□□ -0.37
SMAD9-201ENST00000350148 METTL5Q9NRN9 209 aaKnown RBP12.74□□□□□ -0.37
SMAD9-201ENST00000350148 GEMIN8Q9NWZ8 242 aaKnown RBP12.74□□□□□ -0.37
SMAD9-201ENST00000350148 ARHGAP28Q9P2N2 729 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 BCAP29Q9UHQ4 241 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 PCDHGC5Q9Y5F6 944 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 CAPN6Q9Y6Q1 641 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 NCANO14594 1321 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 CYB561D2O14569 222 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 PDGFRBP09619 1106 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 ZNF135P52742 658 aaPredicted RBP12.74□□□□□ -0.37
SMAD9-201ENST00000350148 RRP1BQ14684 758 aaKnown RBP12.74□□□□□ -0.37
SMAD9-201ENST00000350148 ANO4Q32M45 955 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 IRF2BP1Q8IU81 584 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 CCDC197Q8NCU1 140 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 DEPDC1BQ8WUY9 529 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 DNAJB3Q8WWF6 145 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 SHC3Q92529 594 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 ZBED3Q96IU2 234 aaPredicted RBP12.74□□□□□ -0.37
SMAD9-201ENST00000350148 BFARQ9NZS9 450 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 TLK1Q9UKI8 766 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 TMEM150BA6NC51 233 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 LACTBL1A8MY62 500 aa12.74□□□□□ -0.37
SMAD9-201ENST00000350148 DDX3XO00571 662 aaKnown RBP eCLIP12.74□□□□□ -0.371e-6■■□□□ 13.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms