RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 EP300Q09472 2414 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-203ENST00000346141 TAF12Q16514 161 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 DUOXA2Q1HG44 320 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 HS2ST1Q7LGA3 356 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 CBWD2Q8IUF1 395 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 WDR49Q8IV35 697 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 CEP57L1Q8IYX8 460 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 TOP6BLQ8N6T0 577 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 LEO1Q8WVC0 666 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-203ENST00000346141 GCNAQ96QF7 691 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 LPIN3Q9BQK8 851 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 SEMA4AQ9H3S1 761 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 ZNF334Q9HCZ1 680 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-203ENST00000346141 AGPAT3Q9NRZ7 376 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 ABI2Q9NYB9 513 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-203ENST00000346141 CGNQ9P2M7 1197 aaKnown RBP12.78□□□□□ -0.36
TUBD1-203ENST00000346141 SIX4Q9UIU6 781 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 ZMYM5Q9UJ78 669 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 L1RE1Q9UN81 338 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 PCDHB5Q9Y5E4 795 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 PCDHGA4Q9Y5G9 962 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 SNX9Q9Y5X1 595 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 CFAP54Q96N23 3096 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 TCHHQ07283 1943 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 HEPACAM2A8MVW5 462 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 ZNF263O14978 683 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 TGFB1I1O43294 461 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 LRRN2O75325 713 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 CD72P21854 359 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 PCSK1P29120 753 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 WEE1P30291 646 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 RPS9P46781 194 aaKnown RBP12.78□□□□□ -0.36
TUBD1-203ENST00000346141 LHX1P48742 406 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 FCHO2Q0JRZ9 810 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 SNRNP35Q16560 246 aaKnown RBP12.78□□□□□ -0.36
TUBD1-203ENST00000346141 BMT2Q1RMZ1 405 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 STXBP5Q5T5C0 1151 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 ZC3H14Q6PJT7 736 aaKnown RBP12.78□□□□□ -0.36
TUBD1-203ENST00000346141 DPH6Q7L8W6 267 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 YAF2Q8IY57 180 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 SCFD1Q8WVM8 642 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 CLDN23Q96B33 292 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 BLZF1Q9H2G9 400 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 ABCB6Q9NP58 842 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 DDX43Q9NXZ2 648 aaKnown RBP12.78□□□□□ -0.36
TUBD1-203ENST00000346141 OBP2AQ9NY56 170 aa12.78□□□□□ -0.36
TUBD1-203ENST00000346141 MTF2Q9Y483 593 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-203ENST00000346141 CACNA1IQ9P0X4 2223 aa12.77□□□□□ -0.36
TUBD1-203ENST00000346141 ZNF292O60281 2723 aa12.77□□□□□ -0.36
TUBD1-203ENST00000346141 PTPRJQ12913 1337 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 SPTBN4Q9H254 2564 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 DPYSL4O14531 572 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 CHADO15335 359 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 PRPF40AO75400 957 aaKnown RBP12.77□□□□□ -0.37
TUBD1-203ENST00000346141 SLFN14P0C7P3 912 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 TARSP26639 723 aaKnown RBP12.77□□□□□ -0.37
TUBD1-203ENST00000346141 MLLT6P55198 1093 aaPredicted RBP12.77□□□□□ -0.37
TUBD1-203ENST00000346141 INTS6LQ5JSJ4 861 aaKnown RBP12.77□□□□□ -0.37
TUBD1-203ENST00000346141 GPR158Q5T848 1215 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 LMBRD2Q68DH5 695 aaPredicted RBP12.77□□□□□ -0.37
TUBD1-203ENST00000346141 C1orf228Q6PIY5 440 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 ASCL5Q7RTU5 278 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 ARID3BQ8IVW6 561 aaPredicted RBP12.77□□□□□ -0.37
TUBD1-203ENST00000346141 XXYLT1Q8NBI6 393 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 OR5B17Q8NGF7 314 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 MSANTD3Q96H12 275 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 HPDLQ96IR7 371 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 FAM84AQ96KN4 292 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 MKNK1Q9BUB5 465 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 TASP1Q9H6P5 420 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 SPATA6Q9NWH7 488 aaPredicted RBP12.77□□□□□ -0.37
TUBD1-203ENST00000346141 PIAS3Q9Y6X2 628 aa12.77□□□□□ -0.37
TUBD1-203ENST00000346141 MIA3Q5JRA6 1907 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 NCANO14594 1321 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 SHISA7A6NL88 538 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 ARNTLO00327 626 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 GABRDO14764 452 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 LAMTOR5O43504 91 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 SP9P0CG40 484 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 CASP1P29466 404 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 AFMP43652 599 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 CDR1P51861 262 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 RPL10AP62906 217 aaKnown RBP12.76□□□□□ -0.37
TUBD1-203ENST00000346141 CUL4BQ13620 913 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 PSMD6Q15008 389 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 SOWAHAQ2M3V2 549 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 ZNF528Q3MIS6 628 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 CFAP221Q4G0U5 840 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 NELFCDQ8IXH7 590 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 C12orf56Q8IXR9 622 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 GOLGA5Q8TBA6 731 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 CSGALNACT1Q8TDX6 532 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 GIPC2Q8TF65 315 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 RSPRY1Q96DX4 576 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 FUBP3Q96I24 572 aaKnown RBP eCLIP12.76□□□□□ -0.37
TUBD1-203ENST00000346141 FNBP1Q96RU3 617 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 PKMYT1Q99640 499 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 PI4K2AQ9BTU6 479 aa12.76□□□□□ -0.37
TUBD1-203ENST00000346141 IL21Q9HBE4 155 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms