RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 BTNL10A8MVZ5 291 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 VWA5AO00534 786 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 GAS2O43903 313 aaKnown RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 PECAM1P16284 738 aaPredicted RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 MORF4L2Q15014 288 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 ARMC2Q8NEN0 867 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 ZBTB45Q96K62 511 aaPredicted RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 TRIM56Q9BRZ2 755 aaKnown RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 ATP8B3O60423 1300 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 ADRB2P07550 413 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 GNAT1P11488 350 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 TAC1P20366 129 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 CPA2P48052 419 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 SHROOM1Q2M3G4 852 aaPredicted RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 ANKRD20A4Q4UJ75 823 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 ANKRD20A8PQ5CZ79 823 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 ANKRD20A2Q5SQ80 823 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 ANKRD20A1Q5TYW2 823 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 CLMNQ96JQ2 1002 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 SYNPO2Q9UMS6 1093 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 MTO1Q9Y2Z2 717 aaKnown RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 RBAK-RBAKDNI3L0D1 243 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 GH1P01241 217 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 NQO1P15559 274 aaKnown RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 PPM1FP49593 454 aaPredicted RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 VCPP55072 806 aaKnown RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 AP2B1P63010 937 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 GTF2BQ00403 316 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 MDH1BQ5I0G3 518 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 VSIG10LQ86VR7 867 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 ST13P4Q8IZP2 240 aaPredicted RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 IL31RAQ8NI17 732 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 VCPIP1Q96JH7 1222 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 UPF3AQ9H1J1 476 aaKnown RBP7.52□□□□□ -1.21
VCAN-202ENST00000342785 SLC24A3Q9HC58 644 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 PIK3C2AO00443 1686 aa7.52□□□□□ -1.21
VCAN-202ENST00000342785 LOC100653049A0A140TA62 436 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 KRT34O76011 436 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 GJB6O95452 261 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 LSM8O95777 96 aaKnown RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 MTHFD1LQ6UB35 978 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 FAM71AQ8IYT1 594 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 PURBQ96QR8 312 aaKnown RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 PAFAH2Q99487 392 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 GPATCH2LQ9NWQ4 482 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 CSDE1O75534 798 aaKnown RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 RPS6KA5O75582 802 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 PAMP19021 973 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 TARSP26639 723 aaKnown RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 CASP2P42575 452 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 PAPOLAP51003 745 aaKnown RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 TPI1P60174 286 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 PTPN11Q06124 597 aaPredicted RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 HIC1Q14526 733 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 FKBP1CQ5VVH2 108 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 MPZL3Q6UWV2 235 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 RGS9BPQ6ZS82 235 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 APPL2Q8NEU8 664 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 SLC16A10Q8TF71 515 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 MAGEB18Q96M61 343 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 EPAS1Q99814 870 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 CXorf56Q9H5V9 222 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 XAB2Q9HCS7 855 aaKnown RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 DONSONQ9NYP3 566 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 NINJ2Q9NZG7 142 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 DRG2P55039 364 aaKnown RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 FASTKD1Q53R41 847 aaKnown RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 BATF3Q9NR55 127 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 SHOC2Q9UQ13 582 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 MON2Q7Z3U7 1717 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 ATP9AO75110 1047 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 PPFIA2O75334 1257 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 CALCAP01258 141 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 CUL3Q13618 768 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 SLC35G1Q2M3R5 365 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 TMEM161BQ8NDZ6 487 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 STAMBPL1Q96FJ0 436 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 FAM84AQ96KN4 292 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 CNPY3Q9BT09 278 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 THTPAQ9BU02 230 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 HEY2Q9UBP5 337 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 SLC24A2Q9UI40 661 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 HAO1Q9UJM8 370 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 GRID1Q9ULK0 1009 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 KNDC1Q76NI1 1749 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 ROBO3Q96MS0 1386 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 O00370 1275 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 VDRP11473 427 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 HSD17B4P51659 736 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 ITGB3BPQ13352 177 aaPredicted RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 SLC12A1Q13621 1099 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 DCAF6Q58WW2 860 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 DUPD1Q68J44 220 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 TATDN1Q6P1N9 297 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 SKA2Q8WVK7 121 aaPredicted RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 KDM4CQ9H3R0 1056 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 PCDH9Q9HC56 1237 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 A1CFQ9NQ94 594 aaKnown RBP7.51□□□□□ -1.21
VCAN-202ENST00000342785 VAV3Q9UKW4 847 aa7.51□□□□□ -1.21
VCAN-202ENST00000342785 TRIM33Q9UPN9 1127 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms