RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 CCDC124Q96CT7 223 aaKnown RBP15.4■□□□□ 0.06
RET-201ENST00000340058 EPN3Q9H201 632 aa15.4■□□□□ 0.06
RET-201ENST00000340058 CDC42EP4Q9H3Q1 356 aaKnown RBP15.4■□□□□ 0.06
RET-201ENST00000340058 NPHS2Q9NP85 383 aa15.4■□□□□ 0.06
RET-201ENST00000340058 LACTBL1A8MY62 500 aa15.39■□□□□ 0.05
RET-201ENST00000340058 TADA2AO75478 443 aa15.39■□□□□ 0.05
RET-201ENST00000340058 EPHB2P29323 1055 aa15.39■□□□□ 0.05
RET-201ENST00000340058 HSPA9P38646 679 aaKnown RBP15.39■□□□□ 0.05
RET-201ENST00000340058 ACTRT1Q8TDG2 376 aa15.39■□□□□ 0.05
RET-201ENST00000340058 PWWP2AQ96N64 755 aa15.39■□□□□ 0.05
RET-201ENST00000340058 DDX23Q9BUQ8 820 aaKnown RBP15.39■□□□□ 0.05
RET-201ENST00000340058 RRAGCQ9HB90 399 aa15.39■□□□□ 0.05
RET-201ENST00000340058 PCMTD2Q9NV79 361 aa15.39■□□□□ 0.05
RET-201ENST00000340058 MAGEA9P43362 315 aa15.39■□□□□ 0.05
RET-201ENST00000340058 SPATA2LQ8IUW3 424 aaPredicted RBP15.39■□□□□ 0.05
RET-201ENST00000340058 FAM172AQ8WUF8 416 aa15.39■□□□□ 0.05
RET-201ENST00000340058 SEMA4DQ92854 862 aa15.39■□□□□ 0.05
RET-201ENST00000340058 ATP8B3O60423 1300 aa15.39■□□□□ 0.05
RET-201ENST00000340058 RGPD2P0DJD1 1756 aa15.39■□□□□ 0.05
RET-201ENST00000340058 GTF2A2P52657 109 aa15.39■□□□□ 0.05
RET-201ENST00000340058 NETO2Q8NC67 525 aa15.39■□□□□ 0.05
RET-201ENST00000340058 SEPT5Q99719 369 aaPredicted RBP15.39■□□□□ 0.05
RET-201ENST00000340058 IPO11Q9UI26 975 aaKnown RBP15.39■□□□□ 0.05
RET-201ENST00000340058 AFDNP55196 1824 aaKnown RBP15.38■□□□□ 0.05
RET-201ENST00000340058 TYW5A2RUC4 315 aaKnown RBP15.38■□□□□ 0.05
RET-201ENST00000340058 AGTP01019 485 aa15.38■□□□□ 0.05
RET-201ENST00000340058 POMCP01189 267 aa15.38■□□□□ 0.05
RET-201ENST00000340058 RPL21P46778 160 aaKnown RBP15.38■□□□□ 0.05
RET-201ENST00000340058 TAF6P49848 677 aa15.38■□□□□ 0.05
RET-201ENST00000340058 GRIK4Q16099 956 aa15.38■□□□□ 0.05
RET-201ENST00000340058 ZNF677Q86XU0 584 aa15.38■□□□□ 0.05
RET-201ENST00000340058 MIB1Q86YT6 1006 aa15.38■□□□□ 0.05
RET-201ENST00000340058 BSNDQ8WZ55 320 aa15.38■□□□□ 0.05
RET-201ENST00000340058 KLRG1Q96E93 195 aa15.38■□□□□ 0.05
RET-201ENST00000340058 ZNF541Q9H0D2 1346 aa15.38■□□□□ 0.05
RET-201ENST00000340058 GYG2O15488 501 aa15.38■□□□□ 0.05
RET-201ENST00000340058 ZBTB41Q5SVQ8 909 aa15.38■□□□□ 0.05
RET-201ENST00000340058 JADE1Q6IE81 842 aa15.38■□□□□ 0.05
RET-201ENST00000340058 FOXR1Q6PIV2 292 aa15.38■□□□□ 0.05
RET-201ENST00000340058 TRMT10CQ7L0Y3 403 aaKnown RBP15.38■□□□□ 0.05
RET-201ENST00000340058 CDC26Q8NHZ8 85 aa15.38■□□□□ 0.05
RET-201ENST00000340058 ZFYVE28Q9HCC9 887 aa15.38■□□□□ 0.05
RET-201ENST00000340058 GTSE1Q9NYZ3 720 aa15.38■□□□□ 0.05
RET-201ENST00000340058 BCL9LQ86UU0 1499 aa15.38■□□□□ 0.05
RET-201ENST00000340058 AP1G2O75843 785 aa15.38■□□□□ 0.05
RET-201ENST00000340058 TGFB3P10600 412 aa15.38■□□□□ 0.05
RET-201ENST00000340058 XPAP23025 273 aaPredicted RBP15.38■□□□□ 0.05
RET-201ENST00000340058 NSUN2Q08J23 767 aaKnown RBP eCLIP15.38■□□□□ 0.05
RET-201ENST00000340058 CAPSQ13938 189 aa15.38■□□□□ 0.05
RET-201ENST00000340058 EDEM1Q92611 657 aa15.38■□□□□ 0.05
RET-201ENST00000340058 NUDT5Q9UKK9 219 aa15.38■□□□□ 0.05
RET-201ENST00000340058 UBA6A0AVT1 1052 aaPredicted RBP15.37■□□□□ 0.05
RET-201ENST00000340058 PEX19P40855 299 aa15.37■□□□□ 0.05
RET-201ENST00000340058 ARFIP2P53365 341 aa15.37■□□□□ 0.05
RET-201ENST00000340058 RBBP5Q15291 538 aaKnown RBP15.37■□□□□ 0.05
RET-201ENST00000340058 COBLL1Q53SF7 1204 aa15.37■□□□□ 0.05
RET-201ENST00000340058 SRLQ86TD4 932 aa15.37■□□□□ 0.05
RET-201ENST00000340058 WDR75Q8IWA0 830 aaKnown RBP15.37■□□□□ 0.05
RET-201ENST00000340058 HAUS2Q9NVX0 235 aa15.37■□□□□ 0.05
RET-201ENST00000340058 UBP1Q9NZI7 540 aa15.37■□□□□ 0.05
RET-201ENST00000340058 ZFP69BQ9UJL9 534 aa15.37■□□□□ 0.05
RET-201ENST00000340058 TSPAN16Q9UKR8 245 aa15.37■□□□□ 0.05
RET-201ENST00000340058 RAB21Q9UL25 225 aa15.37■□□□□ 0.05
RET-201ENST00000340058 IGKV6D-41A0A0C4DH26 115 aa15.37■□□□□ 0.05
RET-201ENST00000340058 ZNF862O60290 1169 aa15.37■□□□□ 0.05
RET-201ENST00000340058 MGAT5BQ3V5L5 792 aa15.37■□□□□ 0.05
RET-201ENST00000340058 TRIM67Q6ZTA4 783 aa15.37■□□□□ 0.05
RET-201ENST00000340058 NIPA1Q7RTP0 329 aa15.37■□□□□ 0.05
RET-201ENST00000340058 ALG3Q92685 438 aa15.37■□□□□ 0.05
RET-201ENST00000340058 EPAS1Q99814 870 aa15.37■□□□□ 0.05
RET-201ENST00000340058 PORCNQ9H237 461 aa15.37■□□□□ 0.05
RET-201ENST00000340058 RSAD1Q9HA92 442 aa15.37■□□□□ 0.05
RET-201ENST00000340058 WRAP73Q9P2S5 460 aaPredicted RBP15.37■□□□□ 0.05
RET-201ENST00000340058 ROBO3Q96MS0 1386 aa15.37■□□□□ 0.05
RET-201ENST00000340058 ARHGEF37A1IGU5 675 aa15.37■□□□□ 0.05
RET-201ENST00000340058 EEF2KO00418 725 aaKnown RBP15.37■□□□□ 0.05
RET-201ENST00000340058 NOL4O94818 638 aa15.37■□□□□ 0.05
RET-201ENST00000340058 CD4P01730 458 aa15.37■□□□□ 0.05
RET-201ENST00000340058 IFI35P80217 286 aaPredicted RBP15.37■□□□□ 0.05
RET-201ENST00000340058 GTF2BQ00403 316 aa15.37■□□□□ 0.05
RET-201ENST00000340058 FAM182AQ5T1J6 154 aa15.37■□□□□ 0.05
RET-201ENST00000340058 C11orf63Q6NUN7 778 aa15.37■□□□□ 0.05
RET-201ENST00000340058 TRIM42Q8IWZ5 723 aa15.37■□□□□ 0.05
RET-201ENST00000340058 LRRC34Q8IZ02 419 aa15.37■□□□□ 0.05
RET-201ENST00000340058 TTC39CQ8N584 583 aa15.37■□□□□ 0.05
RET-201ENST00000340058 SLC25A41Q8N5S1 370 aa15.37■□□□□ 0.05
RET-201ENST00000340058 LRRC15Q8TF66 581 aa15.37■□□□□ 0.05
RET-201ENST00000340058 PPWD1Q96BP3 646 aaKnown RBP15.37■□□□□ 0.05
RET-201ENST00000340058 FAM136AQ96C01 138 aa15.37■□□□□ 0.05
RET-201ENST00000340058 TMEM176AQ96HP8 235 aa15.37■□□□□ 0.05
RET-201ENST00000340058 VPS39Q96JC1 886 aa15.37■□□□□ 0.05
RET-201ENST00000340058 SP110Q9HB58 689 aa15.37■□□□□ 0.05
RET-201ENST00000340058 KIF13AQ9H1H9 1805 aa15.37■□□□□ 0.05
RET-201ENST00000340058 IGLV3-22A0A075B6J6 115 aa15.36■□□□□ 0.05
RET-201ENST00000340058 CYB561D2O14569 222 aa15.36■□□□□ 0.05
RET-201ENST00000340058 CXCL11O14625 94 aa15.36■□□□□ 0.05
RET-201ENST00000340058 GRIN3BO60391 1043 aa15.36■□□□□ 0.05
RET-201ENST00000340058 ETFBP38117 255 aa15.36■□□□□ 0.05
RET-201ENST00000340058 ATN1P54259 1190 aaPredicted RBP15.36■□□□□ 0.05
RET-201ENST00000340058 RPL7AP62424 266 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms