RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 GAB3Q8WWW8 586 aa15.31■□□□□ 0.04
COMMD4-202ENST00000338995 ACCSQ96QU6 501 aa15.31■□□□□ 0.04
COMMD4-202ENST00000338995 FAM83CQ9BQN1 747 aa15.31■□□□□ 0.04
COMMD4-202ENST00000338995 MRPL44Q9H9J2 332 aaKnown RBP15.31■□□□□ 0.04
COMMD4-202ENST00000338995 MAGED2Q9UNF1 606 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-202ENST00000338995 PCDHB13Q9Y5F0 798 aa15.31■□□□□ 0.04
COMMD4-202ENST00000338995 NCOR2Q9Y618 2525 aa15.31■□□□□ 0.04
COMMD4-202ENST00000338995 SPTBN2O15020 2390 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 RPP40O75818 363 aaKnown RBP15.3■□□□□ 0.04
COMMD4-202ENST00000338995 AKAP3O75969 853 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 F11P03951 625 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 TFAMQ00059 246 aaKnown RBP15.3■□□□□ 0.04
COMMD4-202ENST00000338995 ZNF268Q14587 947 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-202ENST00000338995 SF3A1Q15459 793 aaKnown RBP15.3■□□□□ 0.04
COMMD4-202ENST00000338995 TMEM196Q5HYL7 178 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 SV2BQ7L1I2 683 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 DYMQ7RTS9 669 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 SYCP3Q8IZU3 236 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 TMEM86AQ8N2M4 240 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 FSIP1Q8NA03 581 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 FIZ1Q96SL8 496 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 ACBD6Q9BR61 282 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 PI4K2AQ9BTU6 479 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 SMG9Q9H0W8 520 aaKnown RBP15.3■□□□□ 0.04
COMMD4-202ENST00000338995 EBF3Q9H4W6 596 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 ABCB6Q9NP58 842 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 STK17AQ9UEE5 414 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 AGAP1Q9UPQ3 857 aa15.3■□□□□ 0.04
COMMD4-202ENST00000338995 ZNF806P0C7X5 589 aa15.29■□□□□ 0.04
COMMD4-202ENST00000338995 PCSK1P29120 753 aa15.29■□□□□ 0.04
COMMD4-202ENST00000338995 LHX1P48742 406 aa15.29■□□□□ 0.04
COMMD4-202ENST00000338995 RBP5P82980 135 aa15.29■□□□□ 0.04
COMMD4-202ENST00000338995 RRAGBQ5VZM2 374 aa15.29■□□□□ 0.04
COMMD4-202ENST00000338995 TXNDC8Q6A555 127 aa15.29■□□□□ 0.04
COMMD4-202ENST00000338995 CPA6Q8N4T0 437 aa15.29■□□□□ 0.04
COMMD4-202ENST00000338995 SPATA18Q8TC71 538 aa15.29■□□□□ 0.04
COMMD4-202ENST00000338995 USP13Q92995 863 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-202ENST00000338995 FAM213AQ9BRX8 229 aa15.29■□□□□ 0.04
COMMD4-202ENST00000338995 ARRDC1-AS1Q9H2J1 176 aa15.29■□□□□ 0.04
COMMD4-202ENST00000338995 PCDHGA5Q9Y5G8 931 aa15.29■□□□□ 0.04
COMMD4-202ENST00000338995 SDK1Q7Z5N4 2213 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 EXTL3O43909 919 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 USP17L7P0C7H9 530 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 HMGA1P17096 107 aaKnown RBP15.28■□□□□ 0.04
COMMD4-202ENST00000338995 PDCP20941 246 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 PDE6CP51160 858 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 GALK1P51570 392 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 CDR1P51861 262 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 LIMK1P53667 647 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 ALCAMQ13740 583 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 CRELD2Q6UXH1 353 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-202ENST00000338995 SFR1Q86XK3 245 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 CSGALNACT2Q8N6G5 542 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 LRRC52Q8N7C0 313 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 LEO1Q8WVC0 666 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-202ENST00000338995 P2RY13Q9BPV8 354 aa15.28■□□□□ 0.04
COMMD4-202ENST00000338995 DUS2Q9NX74 493 aaKnown RBP15.28■□□□□ 0.04
COMMD4-202ENST00000338995 DDX43Q9NXZ2 648 aaKnown RBP15.28■□□□□ 0.04
COMMD4-202ENST00000338995 CACNA1BQ00975 2339 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 TRAV19A0A0A6YYK7 116 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 TISP43B9A030 160 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 RHOBTB1O94844 696 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 GCNT3O95395 438 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 GARTP22102 1010 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 KCNA4P22459 653 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 POLR2BP30876 1174 aaKnown RBP15.27■□□□□ 0.04
COMMD4-202ENST00000338995 IFNAR2P48551 515 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 FAM160A1Q05DH4 1040 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 MYO1EQ12965 1108 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 C8orf34Q49A92 452 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 WDR44Q5JSH3 913 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 L1TD1Q5T7N2 865 aaKnown RBP15.27■□□□□ 0.04
COMMD4-202ENST00000338995 FSTL4Q6MZW2 842 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 SPATA2LQ8IUW3 424 aaPredicted RBP15.27■□□□□ 0.04
COMMD4-202ENST00000338995 EFCAB13Q8IY85 973 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 PDCL2Q8N4E4 241 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 ATP2A3Q93084 1043 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 EPSTI1Q96J88 318 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 TMEM206Q9H813 350 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 HPS4Q9NQG7 708 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.04
COMMD4-202ENST00000338995 EHD2Q9NZN4 543 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 ITGA11Q9UKX5 1188 aa15.27■□□□□ 0.04
COMMD4-202ENST00000338995 SCN1AP35498 2009 aa15.27■□□□□ 0.03
COMMD4-202ENST00000338995 COL4A2P08572 1712 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 KIAA0391O15091 583 aaKnown RBP15.26■□□□□ 0.03
COMMD4-202ENST00000338995 GDF9O60383 454 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 RNF40O75150 1001 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 EPN2O95208 641 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 ITGB3P05106 788 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 CKMP06732 381 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 KRT19P08727 400 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 TMEM191BP0C7N4 346 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 ADSSP30520 456 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 RAP1GAPP47736 663 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 PXNP49023 591 aaPredicted RBP15.26■□□□□ 0.03
COMMD4-202ENST00000338995 GRIN1Q05586 938 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 MTF1Q14872 753 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 SURF1Q15526 300 aa15.26■□□□□ 0.03
COMMD4-202ENST00000338995 ELF2Q15723 593 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms