RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 LHX1P48742 406 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 CLCN5P51795 746 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 AP3M2P53677 418 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 EPHB3P54753 998 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 MYL7Q01449 175 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 TSPY1Q01534 308 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 SMARCB1Q12824 385 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 PLD1Q13393 1074 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 EDRF1Q3B7T1 1238 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 WDR72Q3MJ13 1102 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 ZACNQ401N2 412 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 IQCEQ6IPM2 695 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 FAM171BQ6P995 826 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 PDZD4Q76G19 769 aaPredicted RBP16.35■□□□□ 0.21
PRKN-201ENST00000338468 SV2AQ7L0J3 742 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 DNAJB7Q7Z6W7 309 aaPredicted RBP16.35■□□□□ 0.21
PRKN-201ENST00000338468 ZC3H3Q8IXZ2 948 aaKnown RBP16.35■□□□□ 0.21
PRKN-201ENST00000338468 ADSSL1Q8N142 457 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 SHKBP1Q8TBC3 707 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 SPPL2BQ8TCT7 592 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 MCRS1Q96EZ8 462 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 EEF2KMTQ96G04 330 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 SEPT5Q99719 369 aaPredicted RBP16.35■□□□□ 0.21
PRKN-201ENST00000338468 VRTNQ9H8Y1 702 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 ABI2Q9NYB9 513 aaPredicted RBP16.35■□□□□ 0.21
PRKN-201ENST00000338468 GTF3C4Q9UKN8 822 aa16.35■□□□□ 0.21
PRKN-201ENST00000338468 PHACTR2O75167 634 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 TACC1O75410 805 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 TRIM49P0CI25 452 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 TRIM49CP0CI26 452 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 MYL4P12829 197 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 CD44P16070 742 aaKnown RBP16.34■□□□□ 0.21
PRKN-201ENST00000338468 RPL13P26373 211 aaKnown RBP16.34■□□□□ 0.21
PRKN-201ENST00000338468 TUFMP49411 452 aaKnown RBP16.34■□□□□ 0.21
PRKN-201ENST00000338468 GPR15P49685 360 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 VAMP7P51809 220 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 UBE2HP62256 183 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 PPP3CAQ08209 521 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 BIRC3Q13489 604 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 TRPC3Q13507 836 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 NCOA4Q13772 614 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 MGAT5BQ3V5L5 792 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 ANKRD40Q6AI12 368 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 ISM2Q6H9L7 571 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 FAM186BQ8IYM0 893 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 LEMD2Q8NC56 503 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 PSMG2Q969U7 264 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 ZSWIM3Q96MP5 696 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 MMS19Q96T76 1030 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 PI4K2AQ9BTU6 479 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 CRTAC1Q9NQ79 661 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 ASAH2Q9NR71 780 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 GDE1Q9NZC3 331 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 HOOK1Q9UJC3 728 aaKnown RBP16.34■□□□□ 0.21
PRKN-201ENST00000338468 ASB3Q9Y575 518 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 PCDHB5Q9Y5E4 795 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 DCHS1Q96JQ0 3298 aa16.34■□□□□ 0.21
PRKN-201ENST00000338468 ZNF197O14709 1029 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 IKBKBO14920 756 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 FCARP24071 287 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 CYP2F1P24903 491 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 PCSK1P29120 753 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 PSMC2P35998 433 aaKnown RBP16.33■□□□□ 0.2
PRKN-201ENST00000338468 ID4P47928 161 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 PSMC1P62191 440 aaKnown RBP16.33■□□□□ 0.2
PRKN-201ENST00000338468 ENPEPQ07075 957 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 NFE2Q16621 373 aaPredicted RBP16.33■□□□□ 0.2
PRKN-201ENST00000338468 CYP4A22Q5TCH4 519 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 INTS8Q75QN2 995 aaKnown RBP16.33■□□□□ 0.2
PRKN-201ENST00000338468 GAREM2Q75VX8 874 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 FLCNQ8NFG4 579 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 GPR152Q8TDT2 470 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 GIPC2Q8TF65 315 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 SYAP1Q96A49 352 aaPredicted RBP16.33■□□□□ 0.2
PRKN-201ENST00000338468 SYT15Q9BQS2 421 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 SDCBP2Q9H190 292 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 IL21Q9HBE4 155 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 ABCB6Q9NP58 842 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 NXF1Q9UBU9 619 aaKnown RBP16.33■□□□□ 0.2
PRKN-201ENST00000338468 CDH9Q9ULB4 789 aa16.33■□□□□ 0.2
PRKN-201ENST00000338468 TRIM49BA6NDI0 452 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 PDGFRBP09619 1106 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 FAM163BP0C2L3 166 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 SRFP11831 508 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 HMGA1P17096 107 aaKnown RBP16.32■□□□□ 0.2
PRKN-201ENST00000338468 GCLMP48507 274 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 CDH8P55286 799 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 TNNC1P63316 161 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 MORC3Q14149 939 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 TEAD2Q15562 447 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 ZNF699Q32M78 642 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 CFAP221Q4G0U5 840 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 FAM78AQ5JUQ0 283 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 SDHAF4Q5VUM1 108 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 TANGO2Q6ICL3 276 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 MTSS1LQ765P7 747 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 STKLD1Q8NE28 680 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 KXD1Q9BQD3 176 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 MKNK1Q9BUB5 465 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 PLA2G2FQ9BZM2 168 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms