RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 NOVP48745 357 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 CCZ1BP86790 482 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 CCZ1P86791 482 aaPredicted RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 ZNF235Q14590 738 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 BOLA3Q53S33 107 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 TAB3Q8N5C8 712 aaPredicted RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 CCDC151A5D8V7 595 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 PMLP29590 882 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 C1QBPQ07021 282 aaKnown RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 RAB3IL1Q8TBN0 382 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 PPP4R1Q8TF05 950 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 ZNF558Q96NG5 402 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 TLR8Q9NR97 1041 aaKnown RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 SNX12Q9UMY4 172 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 NDST1P52848 882 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 EIF3BP55884 814 aaKnown RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 CACNB2Q08289 660 aaPredicted RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 MAPK8IP2Q13387 824 aaPredicted RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 UNC93AQ86WB7 457 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 OLA1Q9NTK5 396 aaKnown RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 CAPN2P17655 700 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 CD52P31358 61 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 TUFMP49411 452 aaKnown RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 ZNF131P52739 623 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 POU5F1BQ06416 359 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 SEPT6Q14141 434 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 NPY5RQ15761 445 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 SLC47A2Q86VL8 602 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 GANCQ8TET4 914 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 HASPINQ8TF76 798 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 WDCPQ9H6R7 721 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 UXTQ9UBK9 157 aaPredicted RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 DOCK1Q14185 1865 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 A0A0A6YYK5 440 aaPredicted RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 TREHO43280 583 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 ARF4P18085 180 aaPredicted RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 PTK7Q13308 1070 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 EMBQ6PCB8 327 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 LRRC52Q8N7C0 313 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 SPATA20Q8TB22 786 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 DMAP1Q9NPF5 467 aaPredicted RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 DFFAO00273 331 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 EEF2KO00418 725 aaKnown RBP9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 ENPEPQ07075 957 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 RSPH1Q8WYR4 309 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 SPON2Q9BUD6 331 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.78□□□□□ -0.843e-8■■■■■ 28.8
FNDC3B-201ENST00000336824 KCTD10Q9H3F6 313 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 TRPM5Q9NZQ8 1165 aa9.78□□□□□ -0.84
FNDC3B-201ENST00000336824 CFAP69A5D8W1 941 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 ERICH4A6NGS2 130 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 CAND2O75155 1236 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 LGR5O75473 907 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 ACO1P21399 889 aaKnown RBP9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 MSH2P43246 934 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 RAP1GAPP47736 663 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 EIF3EP60228 445 aaKnown RBP9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 MCL1Q07820 350 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 ARHGAP1Q07960 439 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 DRP2Q13474 957 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 IRF5Q13568 498 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 C4orf22Q6V702 233 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 SMC6Q96SB8 1091 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 ARHGAP28Q9P2N2 729 aa9.77□□□□□ -0.84
FNDC3B-201ENST00000336824 PDE1BQ01064 536 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 CCDC137Q6PK04 289 aaKnown RBP9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 ATPAF2Q8N5M1 289 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 STK25O00506 426 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 ST8SIA6P61647 398 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 LAMB3Q13751 1172 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 P3H1Q32P28 736 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 RAPH1Q70E73 1250 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 LRRC8DQ7L1W4 858 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 LRRC43Q8N309 656 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 DYRK4Q9NR20 520 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 ATP8A1Q9Y2Q0 1164 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 S100BP04271 92 aaPredicted RBP9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 MXRA7P84157 204 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 SPOPLQ6IQ16 392 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 PFDN4Q9NQP4 134 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 GRAP2O75791 330 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 PPIGQ13427 754 aaKnown RBP eCLIP9.77□□□□□ -0.853e-9■■□□□ 13.7
FNDC3B-201ENST00000336824 SLC24A5Q71RS6 500 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 SENP8Q96LD8 212 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 TSEN34Q9BSV6 310 aaKnown RBP9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 FRMD8P1Q9BZ68 369 aaPredicted RBP9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 FAM124BQ9H5Z6 455 aaPredicted RBP9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 FBXL5Q9UKA1 691 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 LRRC10BA6NIK2 292 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 PEX10O60683 326 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 KLRC2P26717 231 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 MAP3K7CLP57077 242 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 KCNA1Q09470 495 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 PDK1Q15118 436 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 CLEC16AQ2KHT3 1053 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 CAPN12Q6ZSI9 719 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 ATL2Q8NHH9 583 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 MFSD14AQ96MC6 490 aa9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 TSPYL2Q9H2G4 693 aaPredicted RBP9.77□□□□□ -0.85
FNDC3B-201ENST00000336824 MAP7D1Q3KQU3 841 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms