RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 LLGL2Q6P1M3 1020 aa15□□□□□ -0.01
APOBEC3B-202ENST00000335760 TMEM270Q6UE05 265 aa15□□□□□ -0.01
APOBEC3B-202ENST00000335760 RNF19BQ6ZMZ0 732 aa15□□□□□ -0.01
APOBEC3B-202ENST00000335760 SPATA31D4Q6ZUB0 917 aa15□□□□□ -0.01
APOBEC3B-202ENST00000335760 CRYBG2Q8N1P7 616 aa15□□□□□ -0.01
APOBEC3B-202ENST00000335760 SLC22A17Q8WUG5 538 aa15□□□□□ -0.01
APOBEC3B-202ENST00000335760 TMEM176AQ96HP8 235 aa15□□□□□ -0.01
APOBEC3B-202ENST00000335760 HEXIM2Q96MH2 286 aaKnown RBP15□□□□□ -0.01
APOBEC3B-202ENST00000335760 CDCA3Q99618 268 aaPredicted RBP15□□□□□ -0.01
APOBEC3B-202ENST00000335760 PKMYT1Q99640 499 aa15□□□□□ -0.01
APOBEC3B-202ENST00000335760 TMLHEQ9NVH6 421 aa15□□□□□ -0.01
APOBEC3B-202ENST00000335760 MYO7AQ13402 2215 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 RNF225M0QZC1 329 aaPredicted RBP14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 ABLIM3O94929 683 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 GLUD1P00367 558 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 EPCAMP16422 314 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 TRIM21P19474 475 aaKnown RBP14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 CYP27A1Q02318 531 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 DRAP1Q14919 205 aaPredicted RBP14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 MAPRE1Q15691 268 aaKnown RBP14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 TPGS2Q68CL5 300 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 FAM171BQ6P995 826 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 LILRA6Q6PI73 481 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 SLC4A11Q8NBS3 891 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 RBBP8NLQ8NC74 664 aaPredicted RBP14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 ZNF461Q8TAF7 563 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 MYCBPAPQ8TBZ2 947 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 SHC3Q92529 594 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 MYLPFQ96A32 169 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 STK33Q9BYT3 514 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 AFF4Q9UHB7 1163 aaKnown RBP14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 DAAM1Q9Y4D1 1078 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 HCFC2Q9Y5Z7 792 aa14.99□□□□□ -0.01
APOBEC3B-202ENST00000335760 MTMR11A4FU01 709 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 FOXN3O00409 490 aaPredicted RBP14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 PNMA6AP0CW24 399 aaPredicted RBP14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 ELF1P32519 619 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 ADCY1Q08828 1119 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 NFE2Q16621 373 aaPredicted RBP14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 CACNA2D4Q7Z3S7 1137 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 SPATA2LQ8IUW3 424 aaPredicted RBP14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 C12orf29Q8N999 325 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 MED10Q9BTT4 135 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 NUP58Q9BVL2 599 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 GPR88Q9GZN0 384 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 CYP4F11Q9HBI6 524 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 ABI2Q9NYB9 513 aaPredicted RBP14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 CEP72Q9P209 647 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 CNTN6Q9UQ52 1028 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 PCDHB5Q9Y5E4 795 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 FSD2A1L4K1 749 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 F8VZ95 297 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 LINC01565O15544 149 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 SEC24AO95486 1093 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 VNN2O95498 520 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 C1RP00736 705 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 PAEPP09466 180 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 ATF2P15336 505 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 ZNF75DP51815 510 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 ZNF132P52740 706 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 RBM10P98175 930 aaKnown RBP14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 SMARCB1Q12824 385 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 CCDC85BQ15834 202 aaPredicted RBP14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 C4orf50Q6ZRC1 276 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 VSTM4Q8IW00 320 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 EFHBQ8N7U6 833 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 ATAD1Q8NBU5 361 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 KREMEN2Q8NCW0 462 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 VN1R2Q8NFZ6 395 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 SPPL2BQ8TCT7 592 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 C2orf15Q8WU43 125 aaKnown RBP14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 PCED1BQ96HM7 432 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 SPAG5Q96R06 1193 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 B3GNT5Q9BYG0 378 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 MAN1C1Q9NR34 630 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 FAM49BQ9NUQ9 324 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 FBXW11Q9UKB1 542 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 SLC27A5Q9Y2P5 690 aa14.98□□□□□ -0.01
APOBEC3B-202ENST00000335760 PRRC2BQ5JSZ5 2229 aaKnown RBP14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 ITIH6Q6UXX5 1313 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 GOLGA6L3A6NEY3 463 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 CLDN5O00501 218 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 PRRG1O14668 218 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 CYP26A1O43174 497 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 CALCAP01258 141 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 VDRP11473 427 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 CCDC130P13994 396 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 CD19P15391 556 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 STAT1P42224 750 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 JAM2P57087 298 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 DUSP4Q13115 394 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 ADAM15Q13444 863 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 KCNC3Q14003 757 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 FIGNQ5HY92 759 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 SPECC1LQ69YQ0 1117 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 SMYD5Q6GMV2 418 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 FAM71AQ8IYT1 594 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 SLC2A14Q8TDB8 520 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 CPLX3Q8WVH0 158 aa14.97□□□□□ -0.01
APOBEC3B-202ENST00000335760 PPM1EQ8WY54 764 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms