RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 YIPF1Q9Y548 306 aa14.98□□□□□ -0.01
LIMS1-201ENST00000332345 MYBPHLA2RUH7 354 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 DCXO43602 365 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 MICAL2O94851 1124 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 HAPLN1P10915 354 aaPredicted RBP14.97□□□□□ -0.01
LIMS1-201ENST00000332345 LAMP2P13473 410 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 MXI1P50539 228 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 CDH8P55286 799 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 VEPH1Q14D04 833 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 TAF12Q16514 161 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 WDR44Q5JSH3 913 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 PDZD4Q76G19 769 aaPredicted RBP14.97□□□□□ -0.01
LIMS1-201ENST00000332345 GET4Q7L5D6 327 aaPredicted RBP14.97□□□□□ -0.01
LIMS1-201ENST00000332345 SPATA2LQ8IUW3 424 aaPredicted RBP14.97□□□□□ -0.01
LIMS1-201ENST00000332345 FAM200AQ8TCP9 573 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 NXPE3Q969Y0 559 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 FUBP3Q96I24 572 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIMS1-201ENST00000332345 FAXDC2Q96IV6 333 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 PI4K2AQ9BTU6 479 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 ASAH2Q9NR71 780 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 TMLHEQ9NVH6 421 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 RAB20Q9NX57 234 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 EPS15L1Q9UBC2 864 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 MAGEC2Q9UBF1 373 aaPredicted RBP14.97□□□□□ -0.01
LIMS1-201ENST00000332345 CDH7Q9ULB5 785 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 NOTCH4Q99466 2003 aa14.97□□□□□ -0.01
LIMS1-201ENST00000332345 N4BP1O75113 896 aaKnown RBP14.96□□□□□ -0.01
LIMS1-201ENST00000332345 ATP2C2O75185 946 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 FGF19O95750 216 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 CCDC192P0DO97 292 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 PTPN1P18031 435 aaKnown RBP14.96□□□□□ -0.01
LIMS1-201ENST00000332345 TRIM21P19474 475 aaKnown RBP14.96□□□□□ -0.01
LIMS1-201ENST00000332345 CDR1P51861 262 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 NLRP12P59046 1061 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 RPL10AP62906 217 aaKnown RBP14.96□□□□□ -0.01
LIMS1-201ENST00000332345 CETN1Q12798 172 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 TPD52L1Q16890 204 aaPredicted RBP14.96□□□□□ -0.01
LIMS1-201ENST00000332345 CFAP221Q4G0U5 840 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 CT47A1Q5JQC4 288 aaPredicted RBP14.96□□□□□ -0.01
LIMS1-201ENST00000332345 DNAJB7Q7Z6W7 309 aaPredicted RBP14.96□□□□□ -0.01
LIMS1-201ENST00000332345 TTC9BQ8N6N2 239 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 ITFG1Q8TB96 612 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 MYCBPAPQ8TBZ2 947 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 FGF13Q92913 245 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 PSMG2Q969U7 264 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 TNIP3Q96KP6 325 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 MYADMQ96S97 322 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 PKMYT1Q99640 499 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 DNAI2Q9GZS0 605 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 SMYD3Q9H7B4 428 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 CYP3A43Q9HB55 503 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 GDE1Q9NZC3 331 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 IGSF9Q9P2J2 1179 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 MUTYHQ9UIF7 546 aa14.96□□□□□ -0.01
LIMS1-201ENST00000332345 DOCK8Q8NF50 2099 aa14.96□□□□□ -0.02
LIMS1-201ENST00000332345 HCRTO43612 131 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 SOAT2O75908 522 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 CYP2F1P24903 491 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 EPHA5P54756 1037 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 PSMC1P62191 440 aaKnown RBP14.95□□□□□ -0.02
LIMS1-201ENST00000332345 NOP14P78316 857 aaKnown RBP14.95□□□□□ -0.02
LIMS1-201ENST00000332345 CYP27A1Q02318 531 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 SPOPLQ6IQ16 392 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 SCARA5Q6ZMJ2 495 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 B3GALNT2Q8NCR0 500 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 KHSRPQ92945 711 aaKnown RBP eCLIP14.95□□□□□ -0.024e-10■■■□□ 14.9
LIMS1-201ENST00000332345 SLC35C1Q96A29 364 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 ELMO3Q96BJ8 720 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 CRTAC1Q9NQ79 661 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.95□□□□□ -0.029e-18■■■■■ 223.6
LIMS1-201ENST00000332345 COQ4Q9Y3A0 265 aa14.95□□□□□ -0.02
LIMS1-201ENST00000332345 PMM2O15305 246 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 MYL4P12829 197 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 ERCC5P28715 1186 aaPredicted RBP14.94□□□□□ -0.02
LIMS1-201ENST00000332345 MAGEA11P43364 429 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 MARSP56192 900 aaKnown RBP14.94□□□□□ -0.02
LIMS1-201ENST00000332345 PTPN21Q16825 1174 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 CBWD6Q4V339 395 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 MDH1BQ5I0G3 518 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 CBWD3Q5JTY5 395 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 PRSS36Q5K4E3 855 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 CBWD5Q5RIA9 395 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 VSTM1Q6UX27 236 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 UNC93AQ86WB7 457 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 HS6ST3Q8IZP7 471 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 TTC39CQ8N584 583 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 GIPC2Q8TF65 315 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 EDAQ92838 391 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 SEMA4DQ92854 862 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 C1QTNF1Q9BXJ1 281 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 BCO2Q9BYV7 579 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 GPR88Q9GZN0 384 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 NIF3L1Q9GZT8 377 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 DNAJC25Q9H1X3 360 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 EPHX3Q9H6B9 360 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 KCNK12Q9HB15 430 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 SORCS3Q9UPU3 1222 aa14.94□□□□□ -0.02
LIMS1-201ENST00000332345 P4HA2O15460 535 aa14.93□□□□□ -0.02
LIMS1-201ENST00000332345 CSH1P0DML2 217 aa14.93□□□□□ -0.02
LIMS1-201ENST00000332345 CSH2P0DML3 217 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms