RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 CPSF3Q9UKF6 684 aaKnown RBP12.41□□□□□ -0.42
DDR1-223ENST00000324771 AFG3L2Q9Y4W6 797 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 DUOX1Q9NRD9 1551 aa12.41□□□□□ -0.42
DDR1-223ENST00000324771 RASSF10A6NK89 507 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 GRIN3BO60391 1043 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 KRT37O76014 449 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 NCAM1P13591 858 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 ACTN3Q08043 901 aaPredicted RBP12.4□□□□□ -0.42
DDR1-223ENST00000324771 MYBPC2Q14324 1141 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 BRSK2Q8IWQ3 736 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 RNPEPQ9H4A4 650 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 XPNPEP1Q9NQW7 623 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 KCND1Q9NSA2 647 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 NUDT5Q9UKK9 219 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 TSPAN16Q9UKR8 245 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 MYH10P35580 1976 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 TXNDC9O14530 226 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 FANCGO15287 622 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 CIB2O75838 187 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 PGK1P00558 417 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 KCNA2P16389 499 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 OR1G1P47890 313 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 PRPSAP1Q14558 356 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 CXCL17Q6UXB2 119 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 C12orf29Q8N999 325 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 ATP11CQ8NB49 1132 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 ZNF473Q8WTR7 871 aaKnown RBP12.4□□□□□ -0.42
DDR1-223ENST00000324771 SKA2Q8WVK7 121 aaPredicted RBP12.4□□□□□ -0.42
DDR1-223ENST00000324771 NCAPGQ9BPX3 1015 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 SYT17Q9BSW7 474 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 PABPC3Q9H361 631 aaKnown RBP12.4□□□□□ -0.42
DDR1-223ENST00000324771 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDR1-223ENST00000324771 TLK1Q9UKI8 766 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 TPX2Q9ULW0 747 aaKnown RBP12.4□□□□□ -0.42
DDR1-223ENST00000324771 CCDC160A6NGH7 325 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 GIPC1O14908 333 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 NCF2P19878 526 aaPredicted RBP12.4□□□□□ -0.42
DDR1-223ENST00000324771 IFI35P80217 286 aaPredicted RBP12.4□□□□□ -0.42
DDR1-223ENST00000324771 CELF3Q5SZQ8 465 aaKnown RBP12.4□□□□□ -0.42
DDR1-223ENST00000324771 IL31Q6EBC2 164 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 DENND1BQ6P3S1 775 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 ABHD15Q6UXT9 468 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 LBX2Q6XYB7 198 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 WDR49Q8IV35 697 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 FAM172AQ8WUF8 416 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 CCT6BQ92526 530 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 SHC3Q92529 594 aa12.4□□□□□ -0.42
DDR1-223ENST00000324771 DOT1LQ8TEK3 1739 aa12.4□□□□□ -0.43
DDR1-223ENST00000324771 PLIN4Q96Q06 1357 aa12.4□□□□□ -0.43
DDR1-223ENST00000324771 IQANK1A0A1B0GTG1 560 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 TCRBV7S2A1N4TA0A589 114 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 CTCFP49711 727 aaPredicted RBP12.39□□□□□ -0.43
DDR1-223ENST00000324771 GCNT1Q02742 428 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 DEUP1Q05D60 604 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 C15orf59Q2T9L4 293 aaPredicted RBP12.39□□□□□ -0.43
DDR1-223ENST00000324771 ZNF484Q5JVG2 852 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 BTBD8Q5XKL5 378 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 FBXW10Q5XX13 1052 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 ZNF677Q86XU0 584 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 THEM5Q8N1Q8 247 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 TMEM176AQ96HP8 235 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 VPS33BQ9H267 617 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 PPARGC1AQ9UBK2 798 aaKnown RBP12.39□□□□□ -0.43
DDR1-223ENST00000324771 M0QYT0 321 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 C2CD2LO14523 706 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 GHRP10912 638 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 RFC1P35251 1148 aaPredicted RBP12.39□□□□□ -0.43
DDR1-223ENST00000324771 FAM71AQ8IYT1 594 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 C7orf43Q8WVR3 580 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 WDR35Q9P2L0 1181 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 ZC3H7BQ9UGR2 993 aaKnown RBP12.39□□□□□ -0.43
DDR1-223ENST00000324771 DNPEPQ9ULA0 475 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 CDH16O75309 829 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 FARP2O94887 1054 aaPredicted RBP12.39□□□□□ -0.43
DDR1-223ENST00000324771 PTENP60484 403 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 ACVR2BQ13705 512 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 BMT2Q1RMZ1 405 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 ZACNQ401N2 412 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 LRRC31Q6UY01 552 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 EDEM1Q92611 657 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 GMLQ99445 158 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 CDT1Q9H211 546 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 ZFYVE28Q9HCC9 887 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 ZNF536O15090 1300 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 ADSSP30520 456 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 FLT3P36888 993 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 TAF6P49848 677 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 TPI1P60174 286 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 SP2Q02086 613 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 POU5F1BQ06416 359 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 DNAJC3Q13217 504 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 MDH1BQ5I0G3 518 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 EFCAB13Q8IY85 973 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 PPFIBP2Q8ND30 876 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 OR6P1Q8NGX9 317 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 XPO6Q96QU8 1125 aaKnown RBP12.39□□□□□ -0.43
DDR1-223ENST00000324771 DDIT4Q9NX09 232 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 ABI2Q9NYB9 513 aaPredicted RBP12.39□□□□□ -0.43
DDR1-223ENST00000324771 PPP2R3BQ9Y5P8 575 aa12.39□□□□□ -0.43
DDR1-223ENST00000324771 LPXNO60711 386 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms