RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 COL8A1P27658 744 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 TRDNQ13061 729 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 CLN3Q13286 438 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 MTMR1Q13613 665 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 SEC23AQ15436 765 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 LONRF3Q496Y0 759 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 SLC8B1Q6J4K2 584 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 TTC30AQ86WT1 665 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 FRMD1Q8N878 549 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 NSUN7Q8NE18 718 aaKnown RBP7.3□□□□□ -1.24
CSTF3-201ENST00000323959 HPS3Q969F9 1004 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 MARVELD3Q96A59 401 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 DEPDC7Q96QD5 511 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 MTMR6Q9Y217 621 aa7.3□□□□□ -1.24
CSTF3-201ENST00000323959 HIVEP1P15822 2718 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 F8W810 466 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 PRC1O43663 620 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 CDKL5O76039 1030 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 MT-CO3P00414 261 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 F13A1P00488 732 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 PARP1P09874 1014 aaKnown RBP7.29□□□□□ -1.24
CSTF3-201ENST00000323959 ATF2P15336 505 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 SYT1P21579 422 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 AFF1P51825 1210 aaKnown RBP7.29□□□□□ -1.24
CSTF3-201ENST00000323959 CYP4A11Q02928 519 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 CATSPER4Q7RTX7 472 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 CADM4Q8NFZ8 388 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 KCNV2Q8TDN2 545 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 LRRC3Q9BY71 257 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 PCED1AQ9H1Q7 454 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 TASP1Q9H6P5 420 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 CBX8Q9HC52 389 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 ZNF302Q9NR11 478 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 CDY1Q9Y6F8 540 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 MEI4A8MW99 385 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 TMEM189-UBE2V1I3L0A0 370 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 ZBTB5O15062 677 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 DDAH1O94760 285 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 MBD3O95983 291 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 APPP05067 770 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 CALM1P0DP23 149 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 CALM2P0DP24 149 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 CALM3P0DP25 149 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 SMARCA1P28370 1054 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 GJB2P29033 226 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 SLC6A4P31645 630 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 TEAD4Q15561 434 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 UBXN11Q5T124 520 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 MFSD6Q6ZSS7 791 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 CXXC5Q7LFL8 322 aaKnown RBP7.29□□□□□ -1.24
CSTF3-201ENST00000323959 TRMT11Q7Z4G4 463 aaKnown RBP7.29□□□□□ -1.24
CSTF3-201ENST00000323959 RALYLQ86SE5 291 aaKnown RBP7.29□□□□□ -1.24
CSTF3-201ENST00000323959 TEX2Q8IWB9 1127 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 PGBD3Q8N328 593 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 HMGB4Q8WW32 186 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 LMBRD1Q9NUN5 540 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 ASB3Q9Y575 518 aa7.29□□□□□ -1.24
CSTF3-201ENST00000323959 PIK3CDO00329 1044 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 BCAT2O15382 392 aaPredicted RBP7.28□□□□□ -1.24
CSTF3-201ENST00000323959 ZBTB24O43167 697 aaPredicted RBP7.28□□□□□ -1.24
CSTF3-201ENST00000323959 CTDNEP1O95476 244 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 HNRNPLP14866 589 aaKnown RBP eCLIP7.28□□□□□ -1.242e-6■■□□□ 12
CSTF3-201ENST00000323959 RBMS1P29558 406 aaKnown RBP7.28□□□□□ -1.24
CSTF3-201ENST00000323959 SCNN1GP51170 649 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 FOSBP53539 338 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 GRIN1Q05586 938 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 USP4Q13107 963 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 NR1H3Q13133 447 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 KCNAB2Q13303 367 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 ABHD15Q6UXT9 468 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 CLEC14AQ86T13 490 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 ESR2Q92731 530 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 ZFRQ96KR1 1074 aaKnown RBP7.28□□□□□ -1.24
CSTF3-201ENST00000323959 FUCA2Q9BTY2 467 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 NEDD4P46934 1319 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 MGAQ8IWI9 3026 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 PDZD2O15018 2839 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 TCRBV21S2A2A0A5A6 115 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 INSM1Q01101 510 aaPredicted RBP7.28□□□□□ -1.24
CSTF3-201ENST00000323959 ROR1Q01973 937 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 ZNF268Q14587 947 aaPredicted RBP7.28□□□□□ -1.24
CSTF3-201ENST00000323959 NTRK3Q16288 839 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 SMTNL2Q2TAL5 461 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 CDCP2Q5VXM1 449 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 MIS18BP1Q6P0N0 1132 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 CEP57Q86XR8 500 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 PIAS4Q8N2W9 510 aaPredicted RBP7.28□□□□□ -1.24
CSTF3-201ENST00000323959 ZCCHC9Q8N567 271 aaKnown RBP7.28□□□□□ -1.24
CSTF3-201ENST00000323959 CUL5Q93034 780 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 TMEM245Q9H330 911 aa7.28□□□□□ -1.24
CSTF3-201ENST00000323959 RBM28Q9NW13 759 aaKnown RBP7.28□□□□□ -1.24
CSTF3-201ENST00000323959 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.28□□□□□ -1.24
CSTF3-201ENST00000323959 K7EQS6 105 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 BACH1O14867 736 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 EFSO43281 561 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 GOLGA8HP0CJ92 632 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 CD1EP15812 388 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 TUSC3Q13454 348 aa7.27□□□□□ -1.25
CSTF3-201ENST00000323959 SART3Q15020 963 aaKnown RBP7.27□□□□□ -1.25
CSTF3-201ENST00000323959 CYB5R4Q7L1T6 521 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms