RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ATL2Q8NHH9 583 aa8□□□□□ -1.13
IFT88-201ENST00000319980 UHMK1Q8TAS1 419 aaKnown RBP8□□□□□ -1.13
IFT88-201ENST00000319980 KAT2BQ92831 832 aa8□□□□□ -1.13
IFT88-201ENST00000319980 SLCO2A1Q92959 643 aa8□□□□□ -1.13
IFT88-201ENST00000319980 ART4Q93070 314 aa8□□□□□ -1.13
IFT88-201ENST00000319980 GCOM2Q9BZD3 368 aaPredicted RBP8□□□□□ -1.13
IFT88-201ENST00000319980 ADAMTS10Q9H324 1103 aa8□□□□□ -1.13
IFT88-201ENST00000319980 VRTNQ9H8Y1 702 aa8□□□□□ -1.13
IFT88-201ENST00000319980 LRRC4CQ9HCJ2 640 aa8□□□□□ -1.13
IFT88-201ENST00000319980 ITGA11Q9UKX5 1188 aa8□□□□□ -1.13
IFT88-201ENST00000319980 GNEQ9Y223 722 aaKnown RBP8□□□□□ -1.13
IFT88-201ENST00000319980 M0QYV0 167 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 SHOX2O60902 331 aaPredicted RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 GPR32O75388 356 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 MICAL2O94851 1124 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 F2P00734 622 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 KRT1P04264 644 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 SHBGP04278 402 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 CYP2C9P11712 490 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 PSMA2P25787 234 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 ADCY8P40145 1251 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 GRM5P41594 1212 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 NDST1P52848 882 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 TAP1Q03518 808 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 PDCLQ13371 301 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 TAF1CQ15572 869 aaPredicted RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 CCNG2Q16589 344 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 GLRA4Q5JXX5 417 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 DENND2CQ68D51 928 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 MFSD7Q6UXD7 560 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 RCOR2Q8IZ40 523 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 JOSD2Q8TAC2 188 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 UBA3Q8TBC4 463 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 DNAJB3Q8WWF6 145 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 RAPGEF5Q92565 580 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 EIF2AQ9BY44 585 aaKnown RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 EPB41L4BQ9H329 900 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 CYP3A43Q9HB55 503 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 LRRD1A4D1F6 860 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 SIGLEC16A6NMB1 481 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 PIK3R2O00459 728 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 TP73O15350 636 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 ERBB2P04626 1255 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 GUCY1A3Q02108 690 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 HIC1Q14526 733 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 SMTNL2Q2TAL5 461 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 KCNT1Q5JUK3 1230 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 MORN1Q5T089 497 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 SLC27A1Q6PCB7 646 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 FOXR1Q6PIV2 292 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 GSTA5Q7RTV2 222 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 C12orf29Q8N999 325 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 GRK7Q8WTQ7 553 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 FAXDC2Q96IV6 333 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 RBM41Q96IZ5 413 aaKnown RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 ZMAT2Q96NC0 199 aaKnown RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 SLITRK1Q96PX8 696 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 TRIM6Q9C030 488 aaPredicted RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 HOMER3Q9NSC5 361 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 BARX2Q9UMQ3 279 aaPredicted RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 NOVA2Q9UNW9 492 aaKnown RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.99□□□□□ -1.13
IFT88-201ENST00000319980 SNX9Q9Y5X1 595 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 TLDC2A0PJX2 215 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 SMIM23A6NLE4 172 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 DCDC2CA8MYV0 355 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 TJP3O95049 919 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 EIF3BP55884 814 aaKnown RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 SKOR1P84550 965 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 ZNF200P98182 395 aaPredicted RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 BEX3Q00994 111 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 MYO1EQ12965 1108 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 SLMAPQ14BN4 828 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 UBAP2Q5T6F2 1119 aaKnown RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 LRRC38Q5VT99 294 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 NOTUMQ6P988 496 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 KDM7AQ6ZMT4 941 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 ZNF365Q70YC5 407 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 PRUNE1Q86TP1 453 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 APOL6Q9BWW8 343 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 ZWILCHQ9H900 591 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 METTL5Q9NRN9 209 aaKnown RBP7.99□□□□□ -1.13
IFT88-201ENST00000319980 WHRNQ9P202 907 aa7.99□□□□□ -1.13
IFT88-201ENST00000319980 CEP350Q5VT06 3117 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 TMEM88BA6NKF7 163 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 TREHO43280 583 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 LRCH4O75427 683 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 HMGCRP04035 888 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 ZNF865P0CJ78 1059 aaPredicted RBP7.98□□□□□ -1.13
IFT88-201ENST00000319980 VDRP11473 427 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 RARGP13631 454 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 ATF2P15336 505 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 ITIH2P19823 946 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 AKAP5P24588 427 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 IVDP26440 423 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 GPD2P43304 727 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 YARSP54577 528 aaKnown RBP7.98□□□□□ -1.13
IFT88-201ENST00000319980 CDC42EP1Q00587 391 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 MFSD10Q14728 455 aa7.98□□□□□ -1.13
IFT88-201ENST00000319980 CNGA2Q16280 664 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms