RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 FBXO36Q8NEA4 188 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 CMTM5Q96DZ9 223 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 MTMR9Q96QG7 549 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 AGO4Q9HCK5 861 aaKnown RBP14.38□□□□□ -0.11
SPAST-201ENST00000315285 FAM153AQ9UHL3 310 aa14.38□□□□□ -0.11
SPAST-201ENST00000315285 COL5A2P05997 1499 aaPredicted RBP14.38□□□□□ -0.11
SPAST-201ENST00000315285 INPP1P49441 399 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 CAPRIN1Q14444 709 aaKnown RBP14.37□□□□□ -0.11
SPAST-201ENST00000315285 CLEC16AQ2KHT3 1053 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 SPATA2LQ8IUW3 424 aaPredicted RBP14.37□□□□□ -0.11
SPAST-201ENST00000315285 SAMD3Q8N6K7 520 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 SLC7A14Q8TBB6 771 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 DACT3Q96B18 629 aaPredicted RBP14.37□□□□□ -0.11
SPAST-201ENST00000315285 ZNF446Q9NWS9 450 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 E2F8A0AVK6 867 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 SLITRK3O94933 977 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 CPA2P48052 419 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 OTUD4Q01804 1114 aaKnown RBP14.37□□□□□ -0.11
SPAST-201ENST00000315285 TRADDQ15628 312 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 PRPF39Q86UA1 669 aaKnown RBP14.37□□□□□ -0.11
SPAST-201ENST00000315285 ZNF669Q96BR6 464 aaPredicted RBP14.37□□□□□ -0.11
SPAST-201ENST00000315285 ZNF518BQ9C0D4 1074 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 HACL1Q9UJ83 578 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 KCNMA1Q12791 1236 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 TAS2R42Q7RTR8 314 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 SYTL5Q8TDW5 730 aaPredicted RBP14.37□□□□□ -0.11
SPAST-201ENST00000315285 ZKSCAN4Q969J2 545 aaPredicted RBP14.37□□□□□ -0.11
SPAST-201ENST00000315285 PDCD2LQ9BRP1 358 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 ARHGEF38Q9NXL2 777 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 TJP2Q9UDY2 1190 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 A0A0U1RQJ8 604 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 MYCP01106 439 aaPredicted RBP14.37□□□□□ -0.11
SPAST-201ENST00000315285 IL10P22301 178 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 RARRES1P49788 294 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 DYNC1I2Q13409 638 aaKnown RBP14.37□□□□□ -0.11
SPAST-201ENST00000315285 SV2CQ496J9 727 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 VPS33BQ9H267 617 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 CD248Q9HCU0 757 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
SPAST-201ENST00000315285 FAM8A1Q9UBU6 413 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 RIC1Q4ADV7 1423 aa14.37□□□□□ -0.11
SPAST-201ENST00000315285 VEGFAP15692 232 aaPredicted RBP14.36□□□□□ -0.11
SPAST-201ENST00000315285 DPEP1P16444 411 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 GNL1P36915 607 aaPredicted RBP14.36□□□□□ -0.11
SPAST-201ENST00000315285 ORC1Q13415 861 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 OTOP1Q7RTM1 612 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 NLRP9Q7RTR0 991 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 TMC3Q7Z5M5 1100 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 TMA16Q96EY4 203 aaKnown RBP14.36□□□□□ -0.11
SPAST-201ENST00000315285 FAM163AQ96GL9 167 aaPredicted RBP14.36□□□□□ -0.11
SPAST-201ENST00000315285 DDX4Q9NQI0 724 aaKnown RBP14.36□□□□□ -0.11
SPAST-201ENST00000315285 MAPTP10636 758 aaKnown RBP14.36□□□□□ -0.11
SPAST-201ENST00000315285 KCNA2P16389 499 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 NT5DC3Q86UY8 548 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 SNX19Q92543 992 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 TSPAN17Q96FV3 270 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 ELMO2Q96JJ3 720 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 SNX5Q9Y5X3 404 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 CDY2AQ9Y6F7 541 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 CDY1Q9Y6F8 540 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 MAP2K7O14733 419 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 AIM2O14862 343 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 ANGPT2O15123 496 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 CYP2C9P11712 490 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 NQO1P15559 274 aaKnown RBP14.36□□□□□ -0.11
SPAST-201ENST00000315285 ANO4Q32M45 955 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 SPOCD1Q6ZMY3 1216 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 MRPL1Q9BYD6 325 aaKnown RBP14.36□□□□□ -0.11
SPAST-201ENST00000315285 PXMP2Q9NR77 195 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 AURKCQ9UQB9 309 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 SYCE1LA8MT33 242 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 KLRC4O43908 158 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 CYP2C8P10632 490 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 PTGER2P43116 358 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 NLRP11P59045 1033 aaKnown RBP14.36□□□□□ -0.11
SPAST-201ENST00000315285 POTEAQ6S8J7 498 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 TMEM121Q9BTD3 319 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 NSMCE4AQ9NXX6 385 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 TSR3Q9UJK0 312 aaKnown RBP14.36□□□□□ -0.11
SPAST-201ENST00000315285 POLIQ9UNA4 740 aa14.36□□□□□ -0.11
SPAST-201ENST00000315285 LOC100653049A0A140TA62 436 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 KRT34O76011 436 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 NPTXRO95502 500 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 FOXD4Q12950 439 aaPredicted RBP14.35□□□□□ -0.11
SPAST-201ENST00000315285 TRIP10Q15642 601 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 RNF219Q5W0B1 726 aaPredicted RBP14.35□□□□□ -0.11
SPAST-201ENST00000315285 TATDN2Q93075 761 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 GDF3Q9NR23 364 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 DPP3Q9NY33 737 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 RIMBP3CA6NJZ7 1639 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 RIMBP3BA6NNM3 1639 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 RIMBP3Q9UFD9 1639 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 MTSS1O43312 755 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 MAP3K6O95382 1288 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 BACE1P56817 501 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 ZNF844Q08AG5 666 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 COBLL1Q53SF7 1204 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 MPZL3Q6UWV2 235 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 EP400NLQ6ZTU2 488 aa14.35□□□□□ -0.11
SPAST-201ENST00000315285 ARHGEF19Q8IW93 802 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms