RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 NBPF15Q8N660 670 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 SLC35G2Q8TBE7 412 aa16.09■□□□□ 0.17
HCFC1-201ENST00000310441 ASNA1O43681 348 aa16.08■□□□□ 0.17
HCFC1-201ENST00000310441 INAQ16352 499 aa16.08■□□□□ 0.17
HCFC1-201ENST00000310441 DDR2Q16832 855 aa16.08■□□□□ 0.17
HCFC1-201ENST00000310441 PDZK1Q5T2W1 519 aa16.08■□□□□ 0.17
HCFC1-201ENST00000310441 TFB1MQ8WVM0 346 aaKnown RBP16.08■□□□□ 0.17
HCFC1-201ENST00000310441 JADE3Q92613 823 aa16.08■□□□□ 0.17
HCFC1-201ENST00000310441 HPS3Q969F9 1004 aa16.08■□□□□ 0.17
HCFC1-201ENST00000310441 GPR63Q9BZJ6 419 aa16.08■□□□□ 0.17
HCFC1-201ENST00000310441 HEG1Q9ULI3 1381 aa16.08■□□□□ 0.17
HCFC1-201ENST00000310441 ITGA9Q13797 1035 aa16.08■□□□□ 0.17
HCFC1-201ENST00000310441 AVENQ9NQS1 362 aaPredicted RBP16.08■□□□□ 0.17
HCFC1-201ENST00000310441 ALDH6A1Q02252 535 aaKnown RBP16.08■□□□□ 0.16
HCFC1-201ENST00000310441 TRIM48Q8IWZ4 208 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 CENPLQ8N0S6 344 aaPredicted RBP16.08■□□□□ 0.16
HCFC1-201ENST00000310441 ASZ1Q8WWH4 475 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 GABBR1Q9UBS5 961 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 DNALI1O14645 258 aaPredicted RBP16.08■□□□□ 0.16
HCFC1-201ENST00000310441 P4HA2O15460 535 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 TMC5Q6UXY8 1006 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 A0A1W2PQJ5 194 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 TBKBP1A7MCY6 615 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 POTEIP0CG38 1075 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 WARSP23381 471 aaKnown RBP16.08■□□□□ 0.16
HCFC1-201ENST00000310441 DYNLL1P63167 89 aaKnown RBP16.08■□□□□ 0.16
HCFC1-201ENST00000310441 NFIAQ12857 509 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 ZNF211Q13398 564 aaPredicted RBP16.08■□□□□ 0.16
HCFC1-201ENST00000310441 POTEGQ6S5H5 508 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 CCDC81Q6ZN84 652 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 CDK5RAP1Q96SZ6 601 aaKnown RBP16.08■□□□□ 0.16
HCFC1-201ENST00000310441 ALDH8A1Q9H2A2 487 aaPredicted RBP16.08■□□□□ 0.16
HCFC1-201ENST00000310441 TRMT6Q9UJA5 497 aaKnown RBP16.08■□□□□ 0.16
HCFC1-201ENST00000310441 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.08■□□□□ 0.16
HCFC1-201ENST00000310441 TTC26A0AVF1 554 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 GH2P01242 217 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 ITGAXP20702 1163 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 KIFC1Q9BW19 673 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 LRRIQ1Q96JM4 1722 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 EPS8Q12929 822 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 CDC73Q6P1J9 531 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 AHI1Q8N157 1196 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 SVOPQ8N4V2 548 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 RPS6KB2Q9UBS0 482 aa16.08■□□□□ 0.16
HCFC1-201ENST00000310441 SFI1A8K8P3 1242 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 EYA4O95677 639 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 RAD23AP54725 363 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 SKP1P63208 163 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 KPNA4O00629 521 aaPredicted RBP16.07■□□□□ 0.16
HCFC1-201ENST00000310441 THRAP10827 490 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 ATP6V1C1P21283 382 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 ARMC4Q5T2S8 1044 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 TTLL6Q8N841 843 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 HMG20AQ9NP66 347 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 IGSF9BQ9UPX0 1349 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 MAP3K4Q9Y6R4 1608 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 POTECB2RU33 542 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 RPLP2P05387 115 aaKnown RBP16.07■□□□□ 0.16
HCFC1-201ENST00000310441 ABCB1P08183 1280 aaPredicted RBP16.07■□□□□ 0.16
HCFC1-201ENST00000310441 NECTIN1Q15223 517 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 WDR48Q8TAF3 677 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 BDH2Q9BUT1 245 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 DCLRE1BQ9H816 532 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 SH3BP1Q9Y3L3 701 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 ESYT3A0FGR9 886 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 TMEM120BA0PK00 339 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 MED26O95402 600 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 CYP19A1P11511 503 aaPredicted RBP16.07■□□□□ 0.16
HCFC1-201ENST00000310441 MLH1P40692 756 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 USPL1Q5W0Q7 1092 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 E2F7Q96AV8 911 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 UBXN6Q9BZV1 441 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 USP17L10C9JJH3 530 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 STX11O75558 287 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 CALB2P22676 271 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 IL12RB1P42701 662 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 POLD3Q15054 466 aaPredicted RBP16.07■□□□□ 0.16
HCFC1-201ENST00000310441 IER5Q5VY09 327 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 MRNIPQ6NTE8 343 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 SLC22A9Q8IVM8 553 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 FMR1NBQ8N0W7 255 aaPredicted RBP16.07■□□□□ 0.16
HCFC1-201ENST00000310441 MCEEQ96PE7 176 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 KLHL20Q9Y2M5 609 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 VIRMAQ69YN4 1812 aaKnown RBP16.07■□□□□ 0.16
HCFC1-201ENST00000310441 PNPLA4P41247 253 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 EFHC1Q5JVL4 640 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 SPANXN2Q5MJ10 180 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 HS6ST3Q8IZP7 471 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 ZNF786Q8N393 782 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 NT5C1AQ9BXI3 368 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 EMILIN2Q9BXX0 1053 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 WWOXQ9NZC7 414 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 AAR2Q9Y312 384 aaKnown RBP16.07■□□□□ 0.16
HCFC1-201ENST00000310441 FLT1P17948 1338 aa16.07■□□□□ 0.16
HCFC1-201ENST00000310441 PEG10Q86TG7 708 aaKnown RBP16.06■□□□□ 0.16
HCFC1-201ENST00000310441 MASTLQ96GX5 879 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 DBNDD1Q9H9R9 158 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 TRPC7Q9HCX4 862 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 ATAD3AQ9NVI7 634 aa16.06■□□□□ 0.16
HCFC1-201ENST00000310441 HPGDP15428 266 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms