RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 TRAPPC3O43617 180 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 NIF3L1Q9GZT8 377 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 EPS8L2Q9H6S3 715 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 OLFML3Q9NRN5 406 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 DIP2AQ14689 1571 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 HLA-DPA1P20036 260 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 RASA1P20936 1047 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 ADORA2BP29275 332 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 SZRD1Q7Z422 152 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 TAGAPQ8N103 731 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 FAM71DQ8N9W8 422 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 SCFD2Q8WU76 684 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 CENPTQ96BT3 561 aa13.71□□□□□ -0.22
SNED1-201ENST00000310397 SNUPNO95149 360 aaKnown RBP13.7□□□□□ -0.22
SNED1-201ENST00000310397 CYP11B2P19099 503 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 GPAT2Q6NUI2 795 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 RDM1Q8NG50 284 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 SPATA33Q96N06 139 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 SIK2Q9H0K1 926 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 PLEKHA5Q9HAU0 1116 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 SLCO1B7G3V0H7 640 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 NDUFB10O96000 172 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 MCL1Q07820 350 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 ATPAF2Q8N5M1 289 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 FAM196BA6NMK8 535 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 GPD1P21695 349 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 STAT5BP51692 787 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
SNED1-201ENST00000310397 CCNG2Q16589 344 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 ZNF34Q8IZ26 560 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 TFB1MQ8WVM0 346 aaKnown RBP13.7□□□□□ -0.22
SNED1-201ENST00000310397 CAAP1Q9H8G2 361 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 SOX13Q9UN79 622 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 GRK2P25098 689 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 RFC5P40937 340 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 PTK6Q13882 451 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 KRT33BQ14525 404 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 SMTNL2Q2TAL5 461 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 EFHBQ8N7U6 833 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 ATP8B4Q8TF62 1192 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNED1-201ENST00000310397 TIMM44O43615 452 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 CPA2P48052 419 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 LMBRD2Q68DH5 695 aaPredicted RBP13.7□□□□□ -0.22
SNED1-201ENST00000310397 RRM2BQ7LG56 351 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 TBX20Q9UMR3 447 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 ZNF839A8K0R7 811 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 ZNF844Q08AG5 666 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 CCDC85BQ15834 202 aaPredicted RBP13.7□□□□□ -0.22
SNED1-201ENST00000310397 ACBD5Q5T8D3 534 aaPredicted RBP13.7□□□□□ -0.22
SNED1-201ENST00000310397 TAGLN3Q9UI15 199 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 MYH13Q9UKX3 1938 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 NWD1Q149M9 1564 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 VWDEQ8N2E2 1590 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 MYH1P12882 1939 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 MYH4Q9Y623 1939 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 LOC100653049A0A140TA62 436 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 XPO1O14980 1071 aaKnown RBP13.7□□□□□ -0.22
SNED1-201ENST00000310397 KRT34O76011 436 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 SULT1E1P49888 294 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 PACS2Q86VP3 889 aa13.7□□□□□ -0.22
SNED1-201ENST00000310397 A0A1B0GW55 424 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 DUX4L2P0CJ85 424 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 DUX4L3P0CJ86 424 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 DUX4L4P0CJ87 422 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 DUX4L5P0CJ88 424 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 DUX4L6P0CJ89 424 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 DUX4L7P0CJ90 424 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 ZNF662Q6ZS27 426 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 MTDHQ86UE4 582 aaKnown RBP13.69□□□□□ -0.22
SNED1-201ENST00000310397 ZFRQ96KR1 1074 aaKnown RBP13.69□□□□□ -0.22
SNED1-201ENST00000310397 PACSIN1Q9BY11 444 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 DUX4Q9UBX2 424 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 CPS1P31327 1500 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 ZNF197O14709 1029 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 ZCCHC18P0CG32 403 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 TCN1P20061 433 aaPredicted RBP13.69□□□□□ -0.22
SNED1-201ENST00000310397 RNF219Q5W0B1 726 aaPredicted RBP13.69□□□□□ -0.22
SNED1-201ENST00000310397 ZNF507Q8TCN5 953 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 SEMA6BQ9H3T3 888 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 SAR1AQ9NR31 198 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 NDFIP2Q9NV92 336 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 FAM153AQ9UHL3 310 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 PDE5AO76074 875 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 CYP11B1P15538 503 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 CSTF3Q12996 717 aaKnown RBP13.69□□□□□ -0.22
SNED1-201ENST00000310397 NTRK3Q16288 839 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 SHCBP1Q8NEM2 672 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 ELMO2Q96JJ3 720 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 JMJD4Q9H9V9 463 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 RIC8BQ9NVN3 520 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 PEX5P50542 639 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 GRB10Q13322 594 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 NAPEPLDQ6IQ20 393 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 PIK3CDO00329 1044 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 EFCAB14O75071 495 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 BTBD8Q5XKL5 378 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 CRELD2Q6UXH1 353 aaPredicted RBP13.69□□□□□ -0.22
SNED1-201ENST00000310397 TMPRSS6Q8IU80 811 aa13.69□□□□□ -0.22
SNED1-201ENST00000310397 GDF3Q9NR23 364 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms