RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 PBKQ96KB5 322 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 ZSWIM1Q9BR11 485 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 ZNF518BQ9C0D4 1074 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 METTL5Q9NRN9 209 aaKnown RBP11.76□□□□□ -0.53
TRIM59-201ENST00000309784 KLHL11Q9NVR0 708 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 TJP2Q9UDY2 1190 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 SCN1AP35498 2009 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 O00370 1275 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 CAND2O75155 1236 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 CYP1A2P05177 515 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 CYP3A5P20815 502 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 CA8P35219 290 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 CNGA2Q16280 664 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 PTPN20Q4JDL3 420 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 MDH1BQ5I0G3 518 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 MON1BQ7L1V2 547 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 CPNE8Q86YQ8 564 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 FAM126BQ8IXS8 530 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 WHAMMQ8TF30 809 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 FTHL17Q9BXU8 183 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 VRTNQ9H8Y1 702 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 PAK6Q9NQU5 681 aaPredicted RBP11.76□□□□□ -0.53
TRIM59-201ENST00000309784 SYNJ2BP-COX16A0A087WUM0 186 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 ATP2C2O75185 946 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 TADA2AO75478 443 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 SNX16P57768 344 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 MCCD1P59942 119 aaPredicted RBP11.76□□□□□ -0.53
TRIM59-201ENST00000309784 RPL7AP62424 266 aaKnown RBP11.76□□□□□ -0.53
TRIM59-201ENST00000309784 GRIK3Q13003 919 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 TUSC3Q13454 348 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 STILQ15468 1287 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 PDCL2Q8N4E4 241 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 PPP1R10Q96QC0 940 aaKnown RBP11.76□□□□□ -0.53
TRIM59-201ENST00000309784 KRT12Q99456 494 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 LRRC4Q9HBW1 653 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 COX16Q9P0S2 106 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 KIAA1257Q9ULG3 409 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRIM59-201ENST00000309784 SIP14410 1827 aa11.76□□□□□ -0.53
TRIM59-201ENST00000309784 MIF4GDA9UHW6 222 aaKnown RBP11.75□□□□□ -0.53
TRIM59-201ENST00000309784 PDE2AO00408 941 aaPredicted RBP11.75□□□□□ -0.53
TRIM59-201ENST00000309784 ODC1P11926 461 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 MMP8P22894 467 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 RWDD2BP57060 319 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 PDCLQ13371 301 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 MBTPS1Q14703 1052 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 TRIM71Q2Q1W2 868 aaKnown RBP11.75□□□□□ -0.53
TRIM59-201ENST00000309784 NOMO2Q5JPE7 1267 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 LRRC57Q8N9N7 239 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 SPATA4Q8NEY3 305 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 KRT35Q92764 455 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 RPGRIP1Q96KN7 1286 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 CPXM1Q96SM3 734 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 ZWILCHQ9H900 591 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 CNTN6Q9UQ52 1028 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 E5RJQ4 531 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 RNF8O76064 485 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 IGFBP6P24592 240 aaPredicted RBP11.75□□□□□ -0.53
TRIM59-201ENST00000309784 MAMLD1Q13495 774 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 KAZNQ674X7 775 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 FBXO46Q6PJ61 603 aaPredicted RBP11.75□□□□□ -0.53
TRIM59-201ENST00000309784 PHF13Q86YI8 300 aaPredicted RBP11.75□□□□□ -0.53
TRIM59-201ENST00000309784 RNPC3Q96LT9 517 aaKnown RBP11.75□□□□□ -0.53
TRIM59-201ENST00000309784 PCSK1NQ9UHG2 260 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 TBKBP1A7MCY6 615 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 CLDN5O00501 218 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 ZNF623O75123 536 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 MARCKSL1P49006 195 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 ATP11AP98196 1134 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 SLC7A5Q01650 507 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 SLC39A5Q6ZMH5 540 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 UNC93AQ86WB7 457 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 CREG2Q8IUH2 290 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
TRIM59-201ENST00000309784 SYT15Q9BQS2 421 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 NGRNQ9NPE2 291 aaKnown RBP11.75□□□□□ -0.53
TRIM59-201ENST00000309784 IP6K2Q9UHH9 426 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 NENFQ9UMX5 172 aa11.75□□□□□ -0.53
TRIM59-201ENST00000309784 TNNT3P45378 269 aaPredicted RBP11.74□□□□□ -0.53
TRIM59-201ENST00000309784 CCDC142Q17RM4 750 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 SIX6OS1Q8N1H7 587 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 THEM5Q8N1Q8 247 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 UBR7Q8N806 425 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 B3GALNT2Q8NCR0 500 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 CXorf38Q8TB03 319 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 VCPIP1Q96JH7 1222 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 AVENQ9NQS1 362 aaPredicted RBP11.74□□□□□ -0.53
TRIM59-201ENST00000309784 STXBP5LQ9Y2K9 1186 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 ZBBXA8MT70 800 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 CTIFO43310 598 aaKnown RBP11.74□□□□□ -0.53
TRIM59-201ENST00000309784 CSPG5O95196 566 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 RAG1P15918 1043 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 GTF2F1P35269 517 aaKnown RBP eCLIP11.74□□□□□ -0.539e-6■□□□□ 8.8
TRIM59-201ENST00000309784 AADACL2Q6P093 401 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 TMCO3Q6UWJ1 677 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 SCUBE3Q8IX30 993 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 GPR161Q8N6U8 529 aaKnown RBP11.74□□□□□ -0.53
TRIM59-201ENST00000309784 OLIG1Q8TAK6 271 aa11.74□□□□□ -0.53
TRIM59-201ENST00000309784 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms