RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ERP27Q96DN0 273 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 TRAPPC9Q96Q05 1148 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 EPAS1Q99814 870 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 SLC2A11Q9BYW1 496 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS50-202ENST00000305866 UBE2TQ9NPD8 197 aaPredicted RBP5.75□□□□□ -1.49
VPS50-202ENST00000305866 SMYD2Q9NRG4 433 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 CYTH4Q9UIA0 394 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 STRIP2Q9ULQ0 834 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 PCDHGC3Q9UN70 934 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 EXOC7Q9UPT5 735 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 C2CD2Q9Y426 696 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 AFG3L2Q9Y4W6 797 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 USH1CQ9Y6N9 552 aa5.75□□□□□ -1.49
VPS50-202ENST00000305866 TRIM64A6NGJ6 449 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 H0YHG0 523 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 ATP2C2O75185 946 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 TMEM63AO94886 807 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 ECEL1O95672 775 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 YWHABP31946 246 aaKnown RBP5.74□□□□□ -1.49
VPS50-202ENST00000305866 AP3M2P53677 418 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 MFAP3P55082 362 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 C1QBPQ07021 282 aaKnown RBP5.74□□□□□ -1.49
VPS50-202ENST00000305866 TRNP1Q6NT89 227 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 UGT2A3Q6UWM9 527 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 ANO5Q75V66 913 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 LONP2Q86WA8 852 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 CBWD2Q8IUF1 395 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 METTL25Q8N6Q8 603 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 UBL4BQ8N7F7 174 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 KCNV2Q8TDN2 545 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 USP6NLQ92738 828 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 ZBTB10Q96DT7 871 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 CSRNP1Q96S65 589 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 SELENOSQ9BQE4 189 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 NFKBIZQ9BYH8 718 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 ZNF385DQ9H6B1 395 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 DNAJB4Q9UDY4 337 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 DNPEPQ9ULA0 475 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 EMCNQ9ULC0 261 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 PTPN22Q9Y2R2 807 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 TEX264Q9Y6I9 313 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 PASKQ96RG2 1323 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 IGKV6-21A0A0C4DH24 114 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 FAM196BA6NMK8 535 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 RIMBP2O15034 1052 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 MAGEC1O60732 1142 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 DKC1O60832 514 aaKnown RBP eCLIP5.74□□□□□ -1.49
VPS50-202ENST00000305866 PSMG1O95456 288 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 LSM8O95777 96 aaKnown RBP5.74□□□□□ -1.49
VPS50-202ENST00000305866 ITGAVP06756 1048 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 RALAP11233 206 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 GLRA2P23416 452 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 CNGA1P29973 690 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 RFC5P40937 340 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 MAGEA4P43358 317 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 RWDD2BP57060 319 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 CYP4A11Q02928 519 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 ATP13A4Q4VNC1 1196 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 ODR4Q5SWX8 454 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 CEP128Q6ZU80 1094 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 HAUS6Q7Z4H7 955 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 TAS1R2Q8TE23 839 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 RTP4Q96DX8 246 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 PDCD2LQ9BRP1 358 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 C1orf21Q9H246 121 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 DHX33Q9H6R0 707 aaKnown RBP5.74□□□□□ -1.49
VPS50-202ENST00000305866 VRTNQ9H8Y1 702 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 QTRT2Q9H974 415 aaKnown RBP5.74□□□□□ -1.49
VPS50-202ENST00000305866 ETNK1Q9HBU6 452 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 LMCD1Q9NZU5 365 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 SIRPGQ9P1W8 387 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.74□□□□□ -1.49
VPS50-202ENST00000305866 hCG_1818297A0A087WSY0 165 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 TMEM150BA6NC51 233 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 TMEM191CA6NGB0 347 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 DCAF8L1A6NGE4 600 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 WDR64B1ANS9 1081 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 STRNO43815 780 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 EXTL3O43909 919 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 RFPL1O75677 317 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 ATP5HO75947 161 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 SORBS2O94875 1100 aaKnown RBP5.74□□□□□ -1.49
VPS50-202ENST00000305866 STAU1O95793 577 aaKnown RBP5.74□□□□□ -1.49
VPS50-202ENST00000305866 TMEM191BP0C7N4 346 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 ALDH3A1P30838 453 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 PAPOLAP51003 745 aaKnown RBP5.74□□□□□ -1.49
VPS50-202ENST00000305866 POU5F1BQ06416 359 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 MCL1Q07820 350 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 KCNJ11Q14654 390 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 KYAT3Q6YP21 454 aaKnown RBP5.74□□□□□ -1.49
VPS50-202ENST00000305866 TAOK1Q7L7X3 1001 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 ANKRD35Q8N283 1001 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 EXD1Q8NHP7 514 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 TUBGCP5Q96RT8 1024 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 SH3GL3Q99963 347 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 BTBD10Q9BSF8 475 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 TDRD3Q9H7E2 651 aaKnown RBP5.74□□□□□ -1.49
VPS50-202ENST00000305866 PRDM16Q9HAZ2 1276 aa5.74□□□□□ -1.49
VPS50-202ENST00000305866 XPNPEP1Q9NQW7 623 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms