RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CNTN3Q9P232 1028 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 DERAQ9Y315 318 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 CEP83Q9Y592 693 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 PI4K2BG5E9Z4 385 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 GOLGA8SH3BPF8 625 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 OPA1O60313 960 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 RECQL4O94761 1208 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 MYCNP04198 464 aaPredicted RBP6.92□□□□□ -1.3
USP47-201ENST00000305481 PFKMP08237 780 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 GJC1P36383 396 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 GABRB2P47870 512 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 CAP1Q01518 475 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 DHX9Q08211 1270 aaKnown RBP6.92□□□□□ -1.3
USP47-201ENST00000305481 UBAP2Q5T6F2 1119 aaKnown RBP6.92□□□□□ -1.3
USP47-201ENST00000305481 DCUN1D2Q6PH85 259 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 CCDC50Q8IVM0 306 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 ACSF2Q96CM8 615 aaPredicted RBP6.92□□□□□ -1.3
USP47-201ENST00000305481 FMO2Q99518 471 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 PLVAPQ9BX97 442 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 BCCIPQ9P287 314 aaKnown RBP eCLIP6.92□□□□□ -1.3
USP47-201ENST00000305481 NEU2Q9Y3R4 380 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 GOLGA6CA6NDK9 693 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 GOLGA8KD6RF30 607 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 HMGCRP04035 888 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 GOLGA6DP0CG33 693 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 VDRP11473 427 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 KRT3P12035 628 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 KRT10P13645 584 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 P4HA1P13674 534 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 IVDP26440 423 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 SSR1P43307 286 aaKnown RBP6.92□□□□□ -1.3
USP47-201ENST00000305481 GSCP56915 257 aaPredicted RBP6.92□□□□□ -1.3
USP47-201ENST00000305481 PSMC1P62191 440 aaKnown RBP6.92□□□□□ -1.3
USP47-201ENST00000305481 TAP1Q03518 808 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 NFX1Q12986 1120 aaKnown RBP6.92□□□□□ -1.3
USP47-201ENST00000305481 PDCLQ13371 301 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 PCBP1Q15365 356 aaKnown RBP eCLIP6.92□□□□□ -1.3
USP47-201ENST00000305481 ZNF771Q7L3S4 317 aaPredicted RBP6.92□□□□□ -1.3
USP47-201ENST00000305481 SH2D3CQ8N5H7 860 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 EMC1Q8N766 993 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 RAPGEF5Q92565 580 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 LRRC45Q96CN5 670 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 SLITRK1Q96PX8 696 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 APOL6Q9BWW8 343 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 GOLGA6AQ9NYA3 693 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 KLK14Q9P0G3 267 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 RASAL2Q9UJF2 1139 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 STRIP2Q9ULQ0 834 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 GABRQQ9UN88 632 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 PIN4Q9Y237 131 aaKnown RBP6.92□□□□□ -1.3
USP47-201ENST00000305481 TLL2Q9Y6L7 1015 aa6.92□□□□□ -1.3
USP47-201ENST00000305481 RALGAPA2Q2PPJ7 1873 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 SMIM28A0A1B0GU29 152 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 C17orf102A2RUQ5 167 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 C3orf70A6NLC5 250 aaPredicted RBP6.91□□□□□ -1.3
USP47-201ENST00000305481 M0QYV0 167 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 HCRTO43612 131 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 ECEL1O95672 775 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 IL1R2P27930 398 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 LMAN1P49257 510 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 CRYBB1P53674 252 aaPredicted RBP6.91□□□□□ -1.3
USP47-201ENST00000305481 ZNF844Q08AG5 666 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 PIGHQ14442 188 aaPredicted RBP6.91□□□□□ -1.3
USP47-201ENST00000305481 XKR4Q5GH76 650 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 LRRC38Q5VT99 294 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 C9orf57Q5W0N0 161 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 KCTD16Q68DU8 428 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 LCLAT1Q6UWP7 414 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 MFSD7Q6UXD7 560 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 DPH6Q7L8W6 267 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 RCOR2Q8IZ40 523 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 ARRDC4Q8NCT1 418 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 TRIB2Q92519 343 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 ART4Q93070 314 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 MCRS1Q96EZ8 462 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 PIWIL1Q96J94 861 aaKnown RBP6.91□□□□□ -1.3
USP47-201ENST00000305481 LPIN3Q9BQK8 851 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 SNX9Q9Y5X1 595 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 TULP2O00295 520 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 PIRO00625 290 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 SPTLC1O15269 473 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 DUSP11O75319 330 aaKnown RBP6.91□□□□□ -1.3
USP47-201ENST00000305481 LRCH4O75427 683 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 GABBR2O75899 941 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 CYBAP13498 195 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 AKR1A1P14550 325 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 TM4SF4P48230 202 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 YARSP54577 528 aaKnown RBP6.91□□□□□ -1.3
USP47-201ENST00000305481 SLC25A11Q02978 314 aaKnown RBP6.91□□□□□ -1.3
USP47-201ENST00000305481 KRT17Q04695 432 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 MYO1EQ12965 1108 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 ZNF268Q14587 947 aaPredicted RBP6.91□□□□□ -1.3
USP47-201ENST00000305481 SOWAHAQ2M3V2 549 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 PKDCCQ504Y2 493 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 TRNP1Q6NT89 227 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 LRIG3Q6UXM1 1119 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 C7orf31Q8N865 590 aa6.91□□□□□ -1.3
USP47-201ENST00000305481 SMG8Q8ND04 991 aaKnown RBP6.91□□□□□ -1.3
USP47-201ENST00000305481 UBLCP1Q8WVY7 318 aaPredicted RBP6.91□□□□□ -1.3
USP47-201ENST00000305481 WNT8BQ93098 351 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms