RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 FAM13AO94988 1023 aa6.29□□□□□ -1.4
ZNF440-201ENST00000304060 CYBBP04839 570 aa6.29□□□□□ -1.4
ZNF440-201ENST00000304060 TPM3P06753 285 aa6.29□□□□□ -1.4
ZNF440-201ENST00000304060 CYP3A5P20815 502 aa6.29□□□□□ -1.4
ZNF440-201ENST00000304060 UBXN11Q5T124 520 aa6.29□□□□□ -1.4
ZNF440-201ENST00000304060 PIK3AP1Q6ZUJ8 805 aa6.29□□□□□ -1.4
ZNF440-201ENST00000304060 NOSTRINQ8IVI9 506 aa6.29□□□□□ -1.4
ZNF440-201ENST00000304060 OTUB2Q96DC9 234 aa6.29□□□□□ -1.4
ZNF440-201ENST00000304060 HCFC1R1Q9NWW0 138 aa6.29□□□□□ -1.4
ZNF440-201ENST00000304060 TPX2Q9ULW0 747 aaKnown RBP6.29□□□□□ -1.4
ZNF440-201ENST00000304060 A0A1B0GTW7 788 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 UPK3BL1B0FP48 263 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 UPK3BL2E5RIL1 263 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 NPC1O15118 1278 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 GPR37O15354 613 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 FLRT2O43155 660 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ATP8B1O43520 1251 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 SFTPCP11686 197 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 TAF6P49848 677 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 RHDQ02161 417 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 GAD2Q05329 585 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 MBTD1Q05BQ5 628 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 MYO1EQ12965 1108 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 MTF1Q14872 753 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 MPZL3Q6UWV2 235 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 SCN4BQ8IWT1 228 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 KRT222Q8N1A0 295 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 KIAA1958Q8N8K9 716 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 CALML4Q96GE6 196 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ZHX3Q9H4I2 956 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 RBM12Q9NTZ6 932 aaKnown RBP6.28□□□□□ -1.4
ZNF440-201ENST00000304060 DEC1Q9P2X7 70 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 USP25Q9UHP3 1055 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 A0A1W2PQD8 194 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 TTLL13PA6NNM8 815 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ZBTB42B2RXF5 422 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 NFICP08651 508 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ANTXR2P58335 489 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 OSTNP61366 133 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 KCNC4Q03721 635 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 SCAPQ12770 1279 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 RESTQ13127 1097 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 CAPSQ13938 189 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 GLRA4Q5JXX5 417 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 C20orf194Q5TEA3 1177 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 PMS2CLQ68D20 193 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 PDZD8Q8NEN9 1154 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 RPLP0P6Q8NHW5 317 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 RHBDD1Q8TEB9 315 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 GANCQ8TET4 914 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ARHGAP9Q9BRR9 750 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 IFT122Q9HBG6 1241 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ARHGEF4Q9NR80 690 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 NCKAP1Q9Y2A7 1128 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ATP6V1DQ9Y5K8 247 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 PLXNA3P51805 1871 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 MYH9P35579 1960 aaKnown RBP6.28□□□□□ -1.4
ZNF440-201ENST00000304060 PDCP20941 246 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 BRCC3P46736 316 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 CLK2P49760 499 aaKnown RBP6.28□□□□□ -1.4
ZNF440-201ENST00000304060 INHBCP55103 352 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 FCHO2Q0JRZ9 810 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 CCDC15Q0P6D6 951 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 DUSP4Q13115 394 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 CCDC6Q16204 474 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 KIAA1324Q6UXG2 1013 aaKnown RBP6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ANO5Q75V66 913 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ARMCX6Q7L4S7 300 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 MAML2Q8IZL2 1156 aaPredicted RBP6.28□□□□□ -1.4
ZNF440-201ENST00000304060 LSMEM2Q8N112 164 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ZNF557Q8N988 423 aaPredicted RBP6.28□□□□□ -1.4
ZNF440-201ENST00000304060 HMGB4Q8WW32 186 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ABI2Q9NYB9 513 aaPredicted RBP6.28□□□□□ -1.4
ZNF440-201ENST00000304060 TAF4O00268 1085 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 TDP2O95551 362 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 SERPINF2P08697 491 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ENGP17813 658 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ADD1P35611 737 aaKnown RBP6.28□□□□□ -1.4
ZNF440-201ENST00000304060 CCT2P78371 535 aaKnown RBP6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ZNF268Q14587 947 aaPredicted RBP6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ZNF771Q7L3S4 317 aaPredicted RBP6.28□□□□□ -1.4
ZNF440-201ENST00000304060 MON1AQ86VX9 555 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 NT5DC4Q86YG4 428 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 DDX12PQ92771 950 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 RBSNQ9H1K0 784 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 MIR1-1HGQ9H1L0 117 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 WDR35Q9P2L0 1181 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 FTSJ1Q9UET6 329 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 MMP17Q9ULZ9 603 aa6.28□□□□□ -1.4
ZNF440-201ENST00000304060 ABLIM3O94929 683 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 HDCP19113 662 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 PXNP49023 591 aaPredicted RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 ORC1Q13415 861 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 UGCGQ16739 394 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 TTC31Q49AM3 519 aaPredicted RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 GRAMD4Q6IC98 578 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 PROSER1Q86XN7 944 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 RNF168Q8IYW5 571 aaPredicted RBP6.27□□□□□ -1.41
ZNF440-201ENST00000304060 SLC39A7Q92504 469 aa6.27□□□□□ -1.41
ZNF440-201ENST00000304060 LRIG1Q96JA1 1093 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms