RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 LRRC41Q15345 812 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 TRMT11Q7Z4G4 463 aaKnown RBP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 ARHGAP22Q7Z5H3 698 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 FUKQ8N0W3 1084 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 PPTC7Q8NI37 304 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 CDKL2Q92772 493 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 HLA-CQ95604 372 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 MS4A14Q96JA4 679 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 C7orf25Q9BPX7 421 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 PHF20Q9BVI0 1012 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 BCO2Q9BYV7 579 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 FAM192AQ9GZU8 254 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 GDF3Q9NR23 364 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 TMEM260Q9NX78 707 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 UBQLN1Q9UMX0 589 aaKnown RBP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 PCDHA11Q9Y5I1 949 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 SMARCB1Q12824 385 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 GRAMD1BQ3KR37 738 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 WASHC2DQ5SRD0 308 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 KRT80Q6KB66 452 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 SLC39A5Q6ZMH5 540 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 FAM47EQ6ZV65 393 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 SCN4BQ8IWT1 228 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 SRRM1Q8IYB3 904 aaKnown RBP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 CENPTQ96BT3 561 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 NRBF2Q96F24 287 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 CCSER1Q9C0I3 900 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 PARVGQ9HBI0 331 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 NCKAP1Q9Y2A7 1128 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 A0A0G2JND7 137 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 TTI1O43156 1089 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 TREHO43280 583 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 SYNCRIPO60506 623 aaKnown RBP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 NDUFS2O75306 463 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 ZNF189O75820 626 aaPredicted RBP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 MCF2P10911 925 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 SHMT1P34896 483 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 SERPINB4P48594 390 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 GPC5P78333 572 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 UBE3AQ05086 875 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 FSCBQ5H9T9 825 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 BZW1Q7L1Q6 419 aaKnown RBP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 MREGQ8N565 214 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 MAML1Q92585 1016 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 SERPINB12Q96P63 405 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 POLR3FQ9H1D9 316 aaPredicted RBP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 MRPL47Q9HD33 250 aaKnown RBP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 DLGAP2Q9P1A6 1054 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 KIAA1024Q9UPX6 916 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 ABLIM1O14639 778 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 IFNB1P01574 187 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 SNAP25P60880 206 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 YWHAGP61981 247 aaKnown RBP eCLIP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 ASPHQ12797 758 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 EIF2B5Q13144 721 aaKnown RBP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 TBCCQ15814 346 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 TRIM60Q495X7 471 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 TREML2Q5T2D2 321 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 TEDDM1Q5T9Z0 273 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 LRRC34Q8IZ02 419 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 RNF149Q8NC42 400 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 SPDYE1Q8NFV5 336 aaPredicted RBP6.68□□□□□ -1.34
SCAPER-201ENST00000303521 TAAR1Q96RJ0 339 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 GMLQ99445 158 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 AMACRQ9UHK6 382 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 MID2Q9UJV3 735 aa6.68□□□□□ -1.34
SCAPER-201ENST00000303521 MAGEC1O60732 1142 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 GPC3P51654 580 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 NLRP11P59045 1033 aaKnown RBP6.67□□□□□ -1.34
SCAPER-201ENST00000303521 ELF3P78545 371 aaPredicted RBP6.67□□□□□ -1.34
SCAPER-201ENST00000303521 ARL13BQ3SXY8 428 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 ANKRD40Q6AI12 368 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 MOXD1Q6UVY6 613 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 PIGOQ8TEQ8 1089 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 FAM161BQ96MY7 647 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 NT5C1BQ96P26 610 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 TRAPPC9Q96Q05 1148 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 TTC1Q99614 292 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 AGXT2Q9BYV1 514 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 TRIM15Q9C019 465 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 CORO1CQ9ULV4 474 aaPredicted RBP6.67□□□□□ -1.34
SCAPER-201ENST00000303521 BTAF1O14981 1849 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 SF3B1O75533 1304 aaKnown RBP eCLIP6.67□□□□□ -1.344e-6■■■■■ 225.8
SCAPER-201ENST00000303521 AFDNP55196 1824 aaKnown RBP6.67□□□□□ -1.34
SCAPER-201ENST00000303521 SGK1O00141 431 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 TTC4O95801 387 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 TIMP1P01033 207 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 ITIH2P19823 946 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 IFRD2Q12894 506 aaPredicted RBP6.67□□□□□ -1.34
SCAPER-201ENST00000303521 MED21Q13503 144 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 USP41Q3LFD5 358 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 CELF3Q5SZQ8 465 aaKnown RBP6.67□□□□□ -1.34
SCAPER-201ENST00000303521 CCDC137Q6PK04 289 aaKnown RBP6.67□□□□□ -1.34
SCAPER-201ENST00000303521 LRP10Q7Z4F1 713 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 FRMD5Q7Z6J6 570 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 ACTRT1Q8TDG2 376 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 NSUN3Q9H649 340 aaKnown RBP6.67□□□□□ -1.34
SCAPER-201ENST00000303521 SAYSD1Q9NPB0 183 aa6.67□□□□□ -1.34
SCAPER-201ENST00000303521 FAM237AA0A1B0GTK4 181 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms