RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 TWNKQ96RR1 684 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 MAN1C1Q9NR34 630 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 CLDND1Q9NY35 253 aa26.09■■□□□ 1.77
HOXC9-201ENST00000303450 SPDYE4A6NLX3 237 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 RFX1P22670 979 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 CDR1P51861 262 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 ADAM15Q13444 863 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 KCNC3Q14003 757 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 MDH1BQ5I0G3 518 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 FAM171BQ6P995 826 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 TMEM270Q6UE05 265 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 UBR7Q8N806 425 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 VN1R2Q8NFZ6 395 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 NEK11Q8NG66 645 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 MYCBPAPQ8TBZ2 947 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 WHAMMQ8TF30 809 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 PKMYT1Q99640 499 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 ELOVL4Q9GZR5 314 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 PLEKHA4Q9H4M7 779 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 TMLHEQ9NVH6 421 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 FBXW11Q9UKB1 542 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 MAFFQ9ULX9 164 aa26.08■■□□□ 1.77
HOXC9-201ENST00000303450 MTCL1Q9Y4B5 1905 aaKnown RBP26.07■■□□□ 1.76
HOXC9-201ENST00000303450 MTMR11A4FU01 709 aa26.07■■□□□ 1.76
HOXC9-201ENST00000303450 CBFA2T2O43439 604 aa26.07■■□□□ 1.76
HOXC9-201ENST00000303450 UCHL3P15374 230 aa26.07■■□□□ 1.76
HOXC9-201ENST00000303450 ACO1P21399 889 aaKnown RBP26.07■■□□□ 1.76
HOXC9-201ENST00000303450 LIN9Q5TKA1 542 aa26.07■■□□□ 1.76
HOXC9-201ENST00000303450 IQCEQ6IPM2 695 aa26.07■■□□□ 1.76
HOXC9-201ENST00000303450 CRYBG2Q8N1P7 616 aa26.07■■□□□ 1.76
HOXC9-201ENST00000303450 C2orf15Q8WU43 125 aaKnown RBP26.07■■□□□ 1.76
HOXC9-201ENST00000303450 HDAC7Q8WUI4 952 aa26.07■■□□□ 1.76
HOXC9-201ENST00000303450 TMEM176AQ96HP8 235 aa26.07■■□□□ 1.76
HOXC9-201ENST00000303450 CYP4F11Q9HBI6 524 aa26.07■■□□□ 1.76
HOXC9-201ENST00000303450 ABI2Q9NYB9 513 aaPredicted RBP26.07■■□□□ 1.76
HOXC9-201ENST00000303450 PCDHB5Q9Y5E4 795 aa26.07■■□□□ 1.76
HOXC9-201ENST00000303450 A0A1W2PQC6 194 aa26.06■■□□□ 1.76
HOXC9-201ENST00000303450 PRRG1O14668 218 aa26.06■■□□□ 1.76
HOXC9-201ENST00000303450 GLP2RO95838 553 aa26.06■■□□□ 1.76
HOXC9-201ENST00000303450 RAPGEF1Q13905 1077 aa26.06■■□□□ 1.76
HOXC9-201ENST00000303450 PTPN21Q16825 1174 aa26.06■■□□□ 1.76
HOXC9-201ENST00000303450 CCDC142Q17RM4 750 aa26.06■■□□□ 1.76
HOXC9-201ENST00000303450 TMEM184AQ6ZMB5 413 aa26.06■■□□□ 1.76
HOXC9-201ENST00000303450 C4orf50Q6ZRC1 276 aa26.06■■□□□ 1.76
HOXC9-201ENST00000303450 SPATA2LQ8IUW3 424 aaPredicted RBP26.06■■□□□ 1.76
HOXC9-201ENST00000303450 ATAD1Q8NBU5 361 aa26.06■■□□□ 1.76
HOXC9-201ENST00000303450 MAFAQ8NHW3 353 aaPredicted RBP26.06■■□□□ 1.76
HOXC9-201ENST00000303450 PABPC5Q96DU9 382 aaKnown RBP26.06■■□□□ 1.76
HOXC9-201ENST00000303450 LPIN3Q9BQK8 851 aa26.06■■□□□ 1.76
HOXC9-201ENST00000303450 XPO4Q9C0E2 1151 aaKnown RBP26.06■■□□□ 1.76
HOXC9-201ENST00000303450 FHOD1Q9Y613 1164 aa26.06■■□□□ 1.76
HOXC9-201ENST00000303450 NOL4O94818 638 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 KRT5P13647 590 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 RAD23BP54727 409 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 CYP27A1Q02318 531 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 DUSP4Q13115 394 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 CTC1Q2NKJ3 1217 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 CCDC149Q6ZUS6 474 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 TCEAL8Q8IYN2 117 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 SPPL2BQ8TCT7 592 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 MYLPFQ96A32 169 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 PCED1BQ96HM7 432 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 HEXIM2Q96MH2 286 aaKnown RBP26.05■■□□□ 1.76
HOXC9-201ENST00000303450 GANQ9H2C0 597 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 DZANK1Q9NVP4 752 aa26.05■■□□□ 1.76
HOXC9-201ENST00000303450 AJAP1Q9UKB5 411 aaPredicted RBP26.05■■□□□ 1.76
HOXC9-201ENST00000303450 SEC24AO95486 1093 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 VNN2O95498 520 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 USP8P40818 1118 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 POLR2FP61218 127 aaKnown RBP26.04■■□□□ 1.76
HOXC9-201ENST00000303450 COL19A1Q14993 1142 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 SLC4A11Q8NBS3 891 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 SLC27A5Q9Y2P5 690 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 DAAM1Q9Y4D1 1078 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 REV3LO60673 3130 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 C8AP07357 584 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 UVSSAQ2YD98 709 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 C12orf29Q8N999 325 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 RBBP8NLQ8NC74 664 aaPredicted RBP26.04■■□□□ 1.76
HOXC9-201ENST00000303450 SLC7A14Q8TBB6 771 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 SHC3Q92529 594 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 FUBP3Q96I24 572 aaKnown RBP eCLIP26.04■■□□□ 1.76
HOXC9-201ENST00000303450 NAA15Q9BXJ9 866 aaKnown RBP26.04■■□□□ 1.76
HOXC9-201ENST00000303450 FAM49BQ9NUQ9 324 aa26.04■■□□□ 1.76
HOXC9-201ENST00000303450 EPHB6O15197 1021 aa26.03■■□□□ 1.76
HOXC9-201ENST00000303450 DRAP1Q14919 205 aaPredicted RBP26.03■■□□□ 1.76
HOXC9-201ENST00000303450 MED10Q9BTT4 135 aa26.03■■□□□ 1.76
HOXC9-201ENST00000303450 STK33Q9BYT3 514 aa26.03■■□□□ 1.76
HOXC9-201ENST00000303450 ABCB6Q9NP58 842 aa26.03■■□□□ 1.76
HOXC9-201ENST00000303450 NLRC4Q9NPP4 1024 aa26.03■■□□□ 1.76
HOXC9-201ENST00000303450 HSFX1Q9UBD0 423 aa26.03■■□□□ 1.76
HOXC9-201ENST00000303450 CNTN6Q9UQ52 1028 aa26.03■■□□□ 1.76
HOXC9-201ENST00000303450 BRWD1Q9NSI6 2320 aa26.02■■□□□ 1.76
HOXC9-201ENST00000303450 RNF225M0QZC1 329 aaPredicted RBP26.02■■□□□ 1.76
HOXC9-201ENST00000303450 PAEPP09466 180 aa26.02■■□□□ 1.76
HOXC9-201ENST00000303450 TUFMP49411 452 aaKnown RBP26.02■■□□□ 1.76
HOXC9-201ENST00000303450 MGAT5BQ3V5L5 792 aa26.02■■□□□ 1.76
HOXC9-201ENST00000303450 CFAP221Q4G0U5 840 aa26.02■■□□□ 1.76
HOXC9-201ENST00000303450 PPM1LQ5SGD2 360 aa26.02■■□□□ 1.76
HOXC9-201ENST00000303450 ANKRD54Q6NXT1 300 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms