RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 RTN3O95197 1032 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 RASA1P20936 1047 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 HTR7P34969 479 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 MCCD1P59942 119 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 GCNT1Q02742 428 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 PWP2Q15269 919 aaKnown RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 MAPK11Q15759 364 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 IMPG1Q17R60 797 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 TRIM16LQ309B1 348 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 ZC3H12AQ5D1E8 599 aaKnown RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 CIAPIN1Q6FI81 312 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 NIPA1Q7RTP0 329 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 ZNF420Q8TAQ5 688 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 ARHGEF26Q96DR7 871 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 INO80BQ9C086 356 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 SCN3BQ9NY72 215 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 H2AFY2Q9P0M6 372 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 APEX2Q9UBZ4 518 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 AMACRQ9UHK6 382 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 MFHAS1Q9Y4C4 1052 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 M0R2C6 588 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 ACADSBP45954 432 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 TTC39BQ5VTQ0 682 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 SH3RF1Q7Z6J0 888 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 IQCKQ8N0W5 287 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 TMIEQ8NEW7 156 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 FLCNQ8NFG4 579 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 PNPLA3Q9NST1 481 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 DDX28Q9NUL7 540 aaKnown RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 WBP11Q9Y2W2 641 aaKnown RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 TMEM94Q12767 1356 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 DIP2CQ9Y2E4 1556 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 ADCY6O43306 1168 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 MYO1DO94832 1006 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 PLCG1P19174 1290 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 MAP4P27816 1152 aaKnown RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 SOX6P35712 828 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 HSD17B3P37058 310 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 PIK3CGP48736 1102 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 ANXA11P50995 505 aaKnown RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 GUCY1A3Q02108 690 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 PTPAQ15257 358 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 SAMD4BQ5PRF9 694 aaKnown RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 SLC22A9Q8IVM8 553 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 C17orf53Q8N3J3 647 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 LCORLQ8N3X6 602 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 RTL3Q8N8U3 475 aaKnown RBP5.46□□□□□ -1.54
SCN1A-201ENST00000303395 CHAMP1Q96JM3 812 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 BCL2L14Q9BZR8 327 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 ANKZF1Q9H8Y5 726 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 LY9Q9HBG7 655 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 CASZ1Q86V15 1759 aa5.46□□□□□ -1.54
SCN1A-201ENST00000303395 SMCO3A2RU48 225 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 HSPA4LO95757 839 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 RPN2P04844 631 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 PSMC3P17980 439 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 AP1S1P61966 158 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 TUBA1BP68363 451 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 KCNA1Q09470 495 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 CDC16Q13042 620 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 MAD2L1Q13257 205 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-201ENST00000303395 HERC3Q15034 1050 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 ZMYND11Q15326 602 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 ADCK5Q3MIX3 580 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 TSHZ3Q63HK5 1081 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 OLFML1Q6UWY5 402 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 TUBA1AQ71U36 451 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 EFHD2Q96C19 240 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-201ENST00000303395 PURBQ96QR8 312 aaKnown RBP5.45□□□□□ -1.54
SCN1A-201ENST00000303395 PRPF18Q99633 342 aaKnown RBP5.45□□□□□ -1.54
SCN1A-201ENST00000303395 YIPF2Q9BWQ6 316 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 ZC3H12CQ9C0D7 883 aaKnown RBP5.45□□□□□ -1.54
SCN1A-201ENST00000303395 PNPLA8Q9NP80 782 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 ANKEF1Q9NU02 776 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 PIK3CDO00329 1044 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 KLF11O14901 512 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 SNX4O95219 450 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 C1QBPQ07021 282 aaKnown RBP5.45□□□□□ -1.54
SCN1A-201ENST00000303395 LRRC74AQ0VAA2 488 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 DRICH1Q6PGQ1 229 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-201ENST00000303395 CAMK1DQ8IU85 385 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 ANKRD42Q8N9B4 389 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 SCAIQ8N9R8 606 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 PSMA8Q8TAA3 256 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 MMS19Q96T76 1030 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 DYRK4Q9NR20 520 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 ATP6V1HQ9UI12 483 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 CD163L1Q9NR16 1453 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 F8VZ95 297 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 WNT7AO00755 349 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 TBC1D4O60343 1298 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 IFNA14P01570 189 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 MYL3P08590 195 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 CHN1P15882 459 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 TNNI1P19237 187 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 CSE1LP55060 971 aaKnown RBP5.45□□□□□ -1.54
SCN1A-201ENST00000303395 NCALDP61601 193 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 AMPD2Q01433 879 aa5.45□□□□□ -1.54
SCN1A-201ENST00000303395 KRT17Q04695 432 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 202.7 ms