RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 RXFP1Q9HBX9 757 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 HOXC10Q9NYD6 342 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 BTBD7Q9P203 1132 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 MCM8Q9UJA3 840 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 CFAP73A6NFT4 308 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 ALOX15BO15296 676 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 TOM1L1O75674 476 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 LSM8O95777 96 aaKnown RBP14.35□□□□□ -0.11
BCCIP-202ENST00000299130 CD48P09326 243 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 HOXC6P09630 235 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 FGFR1P11362 822 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 MAP2K2P36507 400 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 NRLP54845 237 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 IL9RQ01113 521 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 FNBP1LQ5T0N5 605 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 ZPBP2Q6X784 338 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 TMEM192Q8IY95 271 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 THNSL1Q8IYQ7 743 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 EMC1Q8N766 993 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 SLC35B2Q8TB61 432 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 TRPM4Q8TD43 1214 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 NKD2Q969F2 451 aaPredicted RBP14.35□□□□□ -0.11
BCCIP-202ENST00000299130 NCAPGQ9BPX3 1015 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 WDR83Q9BRX9 315 aaKnown RBP14.35□□□□□ -0.11
BCCIP-202ENST00000299130 FOXP3Q9BZS1 431 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 XYLT2Q9H1B5 865 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 NRBP2Q9NSY0 501 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 CPSF3Q9UKF6 684 aaKnown RBP14.35□□□□□ -0.11
BCCIP-202ENST00000299130 L3MBTL1Q9Y468 752 aa14.35□□□□□ -0.11
BCCIP-202ENST00000299130 CLUHO75153 1309 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 ITGAVP06756 1048 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 KRT15P19012 456 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 CDH8P55286 799 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 OTUD4Q01804 1114 aaKnown RBP14.34□□□□□ -0.11
BCCIP-202ENST00000299130 SLC25A11Q02978 314 aaKnown RBP14.34□□□□□ -0.11
BCCIP-202ENST00000299130 LAMTOR4Q0VGL1 99 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 MKRN3Q13064 507 aaKnown RBP14.34□□□□□ -0.11
BCCIP-202ENST00000299130 PIGHQ14442 188 aaPredicted RBP14.34□□□□□ -0.11
BCCIP-202ENST00000299130 ZNF268Q14587 947 aaPredicted RBP14.34□□□□□ -0.11
BCCIP-202ENST00000299130 MORF4L2Q15014 288 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 TAF5Q15542 800 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 DUOXA2Q1HG44 320 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 SGSM1Q2NKQ1 1148 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 DHX37Q8IY37 1157 aaKnown RBP14.34□□□□□ -0.11
BCCIP-202ENST00000299130 RIBC1Q8N443 379 aaPredicted RBP14.34□□□□□ -0.11
BCCIP-202ENST00000299130 GPATCH11Q8N954 259 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 RNF149Q8NC42 400 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 DNERQ8NFT8 737 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 ACTL9Q8TC94 416 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 KLHL29Q96CT2 875 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 MAK16Q9BXY0 300 aaKnown RBP14.34□□□□□ -0.11
BCCIP-202ENST00000299130 MRPL4Q9BYD3 311 aaKnown RBP14.34□□□□□ -0.11
BCCIP-202ENST00000299130 YY1AP1Q9H869 796 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 NXF1Q9UBU9 619 aaKnown RBP14.34□□□□□ -0.11
BCCIP-202ENST00000299130 MGAMO43451 1857 aa14.34□□□□□ -0.11
BCCIP-202ENST00000299130 TCRBV7S3A2A0A539 114 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 OGTO15294 1046 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 B4GALT5O43286 388 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 PRKCBP05771 671 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 PSMA2P25787 234 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 SSTR1P30872 391 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 CDH5P33151 784 aaPredicted RBP14.33□□□□□ -0.11
BCCIP-202ENST00000299130 PTPN7P35236 360 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 TRPC3Q13507 836 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 RNF43Q68DV7 783 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 PPP1R2P3Q6NXS1 205 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 ASRGL1Q7L266 308 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 TDRPQ86YL5 185 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 CCHCR1Q8TD31 782 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 TRAPPC12Q8WVT3 735 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 STAMBPL1Q96FJ0 436 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 STK38LQ9Y2H1 464 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.11
BCCIP-202ENST00000299130 SSC5DA1L4H1 1573 aa14.33□□□□□ -0.11
BCCIP-202ENST00000299130 LOC285556D6RIA3 1793 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 ZBTB42B2RXF5 422 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 CST8O60676 142 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 LRCH4O75427 683 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 ARIH2O95376 493 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 CD19P15391 556 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 EIF4BP23588 611 aaKnown RBP14.33□□□□□ -0.12
BCCIP-202ENST00000299130 CTCFP49711 727 aaPredicted RBP14.33□□□□□ -0.12
BCCIP-202ENST00000299130 ZNF699Q32M78 642 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 EEF1DP3Q658K8 133 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 NIPA2Q8N8Q9 360 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 AGAP11Q8TF27 550 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 CPT1BQ92523 772 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 TTC25Q96NG3 672 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 MYLK2Q9H1R3 596 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 C12orf65Q9H3J6 166 aaKnown RBP14.33□□□□□ -0.12
BCCIP-202ENST00000299130 PCDH9Q9HC56 1237 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 ARHGEF3Q9NR81 526 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 DDX56Q9NY93 547 aaKnown RBP14.33□□□□□ -0.12
BCCIP-202ENST00000299130 KLHL14Q9P2G3 628 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 PHTF1Q9UMS5 762 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 PCDHGC3Q9UN70 934 aa14.33□□□□□ -0.12
BCCIP-202ENST00000299130 PRPF4O43172 522 aaKnown RBP eCLIP14.32□□□□□ -0.12
BCCIP-202ENST00000299130 TFDP1Q14186 410 aa14.32□□□□□ -0.12
BCCIP-202ENST00000299130 CENPUQ71F23 418 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms