RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 CYB561D2O14569 222 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 HNRNPCL1O60812 293 aaKnown RBP14.15□□□□□ -0.14
SKA3-201ENST00000298260 MTA2O94776 668 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 SLITRK3O94933 977 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 CYP3A4P08684 503 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 CDK4P11802 303 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 ADRA2BP18089 450 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 GLRA2P23416 452 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 VAMP7P51809 220 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 RAP1GDS1P52306 607 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 TRIP10Q15642 601 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 ASPRV1Q53RT3 343 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 FNBP1LQ5T0N5 605 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 KLHDC10Q6PID8 442 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 C3orf62Q6ZUJ4 267 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 C1orf186Q6ZWK4 172 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 NME8Q8N427 588 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 GDPD5Q8WTR4 605 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 IWS1Q96ST2 819 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 EBF4Q9BQW3 602 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 PLVAPQ9BX97 442 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 OLFML3Q9NRN5 406 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 RGS17Q9UGC6 210 aaPredicted RBP14.15□□□□□ -0.14
SKA3-201ENST00000298260 APPL1Q9UKG1 709 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 ATRNL1Q5VV63 1379 aa14.15□□□□□ -0.14
SKA3-201ENST00000298260 DENND3A2RUS2 1198 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 A8MXQ7 604 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 LPXNO60711 386 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 ZNF189O75820 626 aaPredicted RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 TM7SF2O76062 418 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 TMCC1O94876 653 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 SETSIPP0DME0 302 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 GEMIN4P57678 1058 aaKnown RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 MPP3Q13368 585 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 GRAMD1BQ3KR37 738 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 FAM71AQ8IYT1 594 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 BANPQ8N9N5 519 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 STKLD1Q8NE28 680 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 POMGNT1Q8WZA1 660 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 TSPYL2Q9H2G4 693 aaPredicted RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 DNALI1O14645 258 aaPredicted RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 GRIN3BO60391 1043 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 ONECUT3O60422 494 aaPredicted RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 APBA3O96018 575 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 ABHD2P08910 425 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 C6orf222P0C671 652 aaPredicted RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 GZMAP12544 262 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 ABCD1P33897 745 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 ADARP55265 1226 aaKnown RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 NADK2Q4G0N4 442 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 SH3D19Q5HYK7 790 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 TCHHL1Q5QJ38 904 aaPredicted RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 TMPRSS6Q8IU80 811 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 MAP7D3Q8IWC1 876 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 SLFN12Q8IYM2 578 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 SMC1BQ8NDV3 1235 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 RIN3Q8TB24 985 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 CNKSR2Q8WXI2 1034 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 RANBP17Q9H2T7 1088 aaKnown RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 ZNF287Q9HBT7 754 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 GINM1Q9NU53 330 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 MTO1Q9Y2Z2 717 aaKnown RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 ZNFX1Q9P2E3 1918 aaKnown RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 C15orf38-AP3S2A0A0A6YYH1 394 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 TCRBV7S3A2A0A539 114 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 TOP3BO95985 862 aaKnown RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 SMARCA1P28370 1054 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 IRX4P78413 519 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 NFIXQ14938 502 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 PRKD1Q15139 912 aaPredicted RBP14.14□□□□□ -0.15
SKA3-201ENST00000298260 IYDQ6PHW0 289 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 ZCCHC23Q6ZST2 131 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 ARPINQ7Z6K5 226 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 DHDDSQ86SQ9 333 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 C20orf27Q9GZN8 174 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 PKD2L1Q9P0L9 805 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 VAV3Q9UKW4 847 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 BRWD3Q6RI45 1802 aa14.14□□□□□ -0.15
SKA3-201ENST00000298260 SMCHD1A6NHR9 2005 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 CAPN14A8MX76 684 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 ZMPSTE24O75844 475 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 TFAP2AP05549 437 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 SMIM18P0DKX4 95 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 UQCRBP14927 111 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 ZNF76P36508 570 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 DYNLT1P63172 113 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 CBX3Q13185 183 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 CCNG2Q16589 344 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 TRIM67Q6ZTA4 783 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 SYDE1Q6ZW31 735 aaPredicted RBP14.13□□□□□ -0.15
SKA3-201ENST00000298260 NET1Q7Z628 596 aaPredicted RBP14.13□□□□□ -0.15
SKA3-201ENST00000298260 TDRPQ86YL5 185 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 RHPN2Q8IUC4 686 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 ZFP28Q8NHY6 868 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 MORC4Q8TE76 937 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 UBAP1Q9NZ09 502 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 UVRAGQ9P2Y5 699 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 hCG_1984214I3L0E3 225 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 DNAJC6O75061 913 aa14.13□□□□□ -0.15
SKA3-201ENST00000298260 OATP04181 439 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms