RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 NUDT17P0C025 328 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 SKIV2L2P42285 1042 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 BNIP1Q12981 228 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 TRIM71Q2Q1W2 868 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 CROCCP2Q86T23 111 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 RNF180Q86T96 592 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 ARHGEF19Q8IW93 802 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 THNSL1Q8IYQ7 743 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 NME8Q8N427 588 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 PCSK9Q8NBP7 692 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 NAF1Q96HR8 494 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 TSC22D3Q99576 134 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 OSBPL1AQ9BXW6 950 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 RAB17Q9H0T7 212 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 TMEM8AQ9HCN3 771 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.05□□□□□ -1.28
TMC1-201ENST00000297784 ATP8B3O60423 1300 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 DCDC2CA8MYV0 355 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 P4HA2O15460 535 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 GNAT1P11488 350 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 KRT13P13646 458 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 CTCFP49711 727 aaPredicted RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 CRYBB1P53674 252 aaPredicted RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 MYL7Q01449 175 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 SLC10A6Q3KNW5 377 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 KRT71Q3SY84 523 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 ZNF568Q3ZCX4 644 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 ZACNQ401N2 412 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 KRT39Q6A163 491 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 TRAF7Q6Q0C0 670 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 ASRGL1Q7L266 308 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 SDCCAG8Q86SQ7 713 aaPredicted RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 BRSK2Q8IWQ3 736 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 CFAP61Q8NHU2 1237 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 HELQQ8TDG4 1101 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 KAT5Q92993 513 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 PLCD4Q9BRC7 762 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 TCHPQ9BT92 498 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 PI4K2AQ9BTU6 479 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 CELF4Q9BZC1 486 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 SENP6Q9GZR1 1112 aaPredicted RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.05□□□□□ -1.28
TMC1-201ENST00000297784 INTS2Q9H0H0 1204 aaKnown RBP7.05□□□□□ -1.28
TMC1-201ENST00000297784 NEUROG2Q9H2A3 272 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 SLITRK6Q9H5Y7 841 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 FAM114A2Q9NRY5 505 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 AIPL1Q9NZN9 384 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 APEX2Q9UBZ4 518 aa7.05□□□□□ -1.28
TMC1-201ENST00000297784 BUB1O43683 1085 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 B4GALT4O60513 344 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 CAPN15O75808 1086 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 MMEP08473 750 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 STAG3L1P0CL83 205 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 CXCL8P10145 99 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 GTF2H1P32780 548 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 KCNJ2P63252 427 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 CDC42EP1Q00587 391 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 UBXN11Q5T124 520 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 TAF2Q6P1X5 1199 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 ALKAL1Q6UXT8 129 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 APBB1IPQ7Z5R6 666 aaPredicted RBP7.04□□□□□ -1.28
TMC1-201ENST00000297784 ERICH1Q86X53 443 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 UBLCP1Q8WVY7 318 aaPredicted RBP7.04□□□□□ -1.28
TMC1-201ENST00000297784 TSEN34Q9BSV6 310 aaKnown RBP7.04□□□□□ -1.28
TMC1-201ENST00000297784 GCOM2Q9BZD3 368 aaPredicted RBP7.04□□□□□ -1.28
TMC1-201ENST00000297784 ADAM7Q9H2U9 754 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 ADAM22Q9P0K1 906 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 NOC2LQ9Y3T9 749 aaKnown RBP7.04□□□□□ -1.28
TMC1-201ENST00000297784 HES2Q9Y543 173 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 SCN1AP35498 2009 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 LRRD1A4D1F6 860 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 MOXD2PA6NHM9 499 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 O00370 1275 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 SNX3O60493 162 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 UBOX5O94941 541 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 MCF2P10911 925 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 CHN1P15882 459 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 GNAZP19086 355 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 MXI1P50539 228 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 CDK7P50613 346 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 COPS2P61201 443 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 LRRC34Q8IZ02 419 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 KREMEN1Q96MU8 473 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 TMEM109Q9BVC6 243 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 TRPV6Q9H1D0 765 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 ECT2Q9H8V3 914 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 AGO3Q9H9G7 860 aaKnown RBP7.04□□□□□ -1.28
TMC1-201ENST00000297784 APOBEC3GQ9HC16 384 aaKnown RBP7.04□□□□□ -1.28
TMC1-201ENST00000297784 IRAK4Q9NWZ3 460 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 RAB20Q9NX57 234 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 CDY2AQ9Y6F7 541 aa7.04□□□□□ -1.28
TMC1-201ENST00000297784 XIRP2A4UGR9 3374 aa7.03□□□□□ -1.28
TMC1-201ENST00000297784 DPPA5A6NC42 116 aa7.03□□□□□ -1.28
TMC1-201ENST00000297784 LACTBL1A8MY62 500 aa7.03□□□□□ -1.28
TMC1-201ENST00000297784 SERPING1P05155 500 aa7.03□□□□□ -1.28
TMC1-201ENST00000297784 TNNI1P19237 187 aa7.03□□□□□ -1.28
TMC1-201ENST00000297784 MSH2P43246 934 aa7.03□□□□□ -1.28
TMC1-201ENST00000297784 MRPS6P82932 125 aaKnown RBP7.03□□□□□ -1.28
TMC1-201ENST00000297784 ATP11AP98196 1134 aa7.03□□□□□ -1.28
TMC1-201ENST00000297784 GFPT1Q06210 699 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms