RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 IRF6O14896 467 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 RNF8O76064 485 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 CD48P09326 243 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 TNFSF9P41273 254 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 GDF10P55107 478 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 ZNF516Q92618 1163 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 RBM41Q96IZ5 413 aaKnown RBP13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 TRIM56Q9BRZ2 755 aaKnown RBP13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 SEPT10Q9P0V9 454 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 FEM1BQ9UK73 627 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 NENFQ9UMX5 172 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 RIPK3Q9Y572 518 aa13.98□□□□□ -0.17
TNFRSF21-201ENST00000296861 CCDC88AQ3V6T2 1871 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 NVLO15381 856 aaKnown RBP13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 KRT3P12035 628 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 CAP2P40123 477 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 HMGCS2P54868 508 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 CDH6P55285 790 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 GTF2BQ00403 316 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 LMNB2Q03252 620 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 SLC15A2Q16348 729 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 KHDC1Q4VXA5 237 aaKnown RBP13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 OR6B2Q6IFH4 312 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 MFSD5Q6N075 450 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 SPATA18Q8TC71 538 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 CD101Q93033 1021 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 WNK4Q96J92 1243 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 PCMTD2Q9NV79 361 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 KCND2Q9NZV8 630 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 SCINQ9Y6U3 715 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 PLIN4Q96Q06 1357 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 CCDC189A1A4V9 331 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 MCF2LO15068 1137 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 SLC1A1P43005 524 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 MMRN1Q13201 1228 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 TAF5Q15542 800 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 ZNF772Q68DY9 489 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 SPOCD1Q6ZMY3 1216 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 CCDC60Q8IWA6 550 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 POU5F2Q8N7G0 328 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 C7orf31Q8N865 590 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 TMEM35BQ8NCS4 154 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 OLIG1Q8TAK6 271 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 UCMAQ8WVF2 138 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 TRIM11Q96F44 468 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 GBP5Q96PP8 586 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 IDI2Q9BXS1 227 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 RNPEPL1Q9HAU8 725 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 ARL8BQ9NVJ2 186 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 ZFATQ9P243 1243 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 IP6K2Q9UHH9 426 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 UBE4BO95155 1302 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 DPPA5A6NC42 116 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 DNALI1O14645 258 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 P4HA2O15460 535 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 ZNF862O60290 1169 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 AP1G2O75843 785 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 CST3P01034 146 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 SERPINB6P35237 376 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 RBBP5Q15291 538 aaKnown RBP13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 RNF220Q5VTB9 566 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 RSPH3Q86UC2 560 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 SLC9A9Q8IVB4 645 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 ATP11CQ8NB49 1132 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 L3MBTL3Q96JM7 780 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 PDCD2LQ9BRP1 358 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 NR2E3Q9Y5X4 410 aa13.97□□□□□ -0.17
TNFRSF21-201ENST00000296861 TCRBV7S3A2A0A539 114 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 SPDYE5A6NIY4 337 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 TRIM49D1C9J1S8 452 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 CIB2O75838 187 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 GJB1P08034 283 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 CALB2P22676 271 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 FAAP100Q0VG06 881 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 MKRN3Q13064 507 aaKnown RBP13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 NR1H3Q13133 447 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 HADHQ16836 314 aaKnown RBP13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 C1orf146Q5VVC0 180 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 ALYREFQ86V81 257 aaKnown RBP13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 AGGF1Q8N302 714 aaeCLIP13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 VTI1AQ96AJ9 217 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 FAM81BQ96LP2 452 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 TMEM120AQ9BXJ8 343 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 APOBEC3GQ9HC16 384 aaKnown RBP13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 ACSS2Q9NR19 701 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 F7P08709 466 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 GNAT1P11488 350 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 NCF2P19878 526 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 GLRA2P23416 452 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 RFC1P35251 1148 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 ELK3P41970 407 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 GEMIN4P57678 1058 aaKnown RBP13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 KLC1Q07866 573 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 PGM5Q15124 567 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 ABRAQ8N0Z2 381 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 FLAD1Q8NFF5 587 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 STK32AQ8WU08 396 aa13.96□□□□□ -0.17
TNFRSF21-201ENST00000296861 APOL6Q9BWW8 343 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms