RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 RIPK2O43353 540 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 MYL2P10916 166 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 SLC9A1P19634 815 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 YWHABP31946 246 aaKnown RBP18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 B3GNT6Q6ZMB0 384 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 LRRC6Q86X45 466 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 OTUD5Q96G74 571 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 TRIM62Q9BVG3 475 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 CDC42EP4Q9H3Q1 356 aaKnown RBP18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 SPDYE16A6NNV3 312 aaPredicted RBP18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 CYP26A1O43174 497 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 SHOX2O60902 331 aaPredicted RBP18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 MUTP22033 750 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 ATICP31939 592 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 ALDH5A1P51649 535 aaPredicted RBP18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 SPDYE2Q495Y8 402 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 SLC10A5Q5PT55 438 aa18.27■□□□□ 0.51
PCDHA13-201ENST00000289272 ENO3P13929 434 aaPredicted RBP18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 MCL1Q07820 350 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 PKN1Q16512 942 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 LACTB2Q53H82 288 aaPredicted RBP18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 URGCPQ8TCY9 931 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 ATAD3AQ9NVI7 634 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 ZNF70Q9UC06 446 aaPredicted RBP18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 HUS1O60921 280 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 ATP6V1C1P21283 382 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 CENPPQ6IPU0 288 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 CCDC80Q76M96 950 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 CREG2Q8IUH2 290 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 HSPBP1Q9NZL4 362 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 PRR12Q9ULL5 1215 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 TMEM247A6NEH6 219 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 BTNL10A8MVZ5 291 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 TPP2P29144 1249 aaPredicted RBP18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 ACTR2P61160 394 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 GRB10Q13322 594 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 SLC45A4Q5BKX6 768 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 EFCAB1Q9HAE3 211 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 CHI3L2Q15782 390 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 TTMPQ5BVD1 217 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 ERMARDQ5T6L9 678 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 PATL1Q86TB9 770 aaKnown RBP18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 OR6B3Q8NGW1 331 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 SNRNP27Q8WVK2 155 aaKnown RBP18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 HEY1Q9Y5J3 304 aa18.26■□□□□ 0.51
PCDHA13-201ENST00000289272 PI4K2BG5E9Z4 385 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 BNC2Q6ZN30 1099 aaPredicted RBP18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 ZMYND8Q9ULU4 1186 aaPredicted RBP18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 CHRNA5P30532 468 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 TSPY1Q01534 308 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 CAAP1Q9H8G2 361 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 COPG1Q9Y678 874 aaKnown RBP18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 A0A087X0T9 212 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 MAFGO15525 162 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 SLC25A27O95847 323 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 ALBP02768 609 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 FAM228BP0C875 321 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 ADARP55265 1226 aaKnown RBP18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 PRAMEP78395 509 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 MTFR1Q15390 333 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 PARP6Q2NL67 630 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 MPP4Q96JB8 637 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 ZCCHC18P0CG32 403 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 ILF2Q12905 390 aaKnown RBP18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 NDUFAF2Q8N183 169 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 ZNF280CQ8ND82 737 aa18.25■□□□□ 0.51
PCDHA13-201ENST00000289272 ALADP13716 330 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 RASA2Q15283 850 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 PPP6R3Q5H9R7 873 aaPredicted RBP18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 CYGBQ8WWM9 190 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 SPATA33Q96N06 139 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 RBAKQ9NYW8 714 aaPredicted RBP18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 ARHGAP20Q9P2F6 1191 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 HACL1Q9UJ83 578 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 AGO2Q9UKV8 859 aaKnown RBP18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 C2CD2Q9Y426 696 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 XPO1O14980 1071 aaKnown RBP18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 SLC37A4O43826 429 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 PSMA4P25789 261 aaKnown RBP18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 CDO1Q16878 200 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 ADGRA1Q86SQ6 560 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 ARID3BQ8IVW6 561 aaPredicted RBP18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 ALG13Q9NP73 1137 aaKnown RBP18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 DDX5P17844 614 aaKnown RBP18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 CDH6P55285 790 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 RUNX1T1Q06455 604 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 MYBPC2Q14324 1141 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 CCNG2Q16589 344 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 TMEM120AQ9BXJ8 343 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 GOLGA8RI6L899 631 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 GALNT4Q8N4A0 578 aa18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 JPH1Q9HDC5 661 aaPredicted RBP18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 C20orf96Q9NUD7 363 aaPredicted RBP18.24■□□□□ 0.51
PCDHA13-201ENST00000289272 TNPO2O14787 897 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 WDR47O94967 919 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 UNC5CO95185 931 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 PPIDQ08752 370 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 NFX1Q12986 1120 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 XRCC4Q13426 336 aa18.23■□□□□ 0.51
PCDHA13-201ENST00000289272 SNAPC2Q13487 334 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms