RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 PDGFRAP16234 1089 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 LMO2P25791 158 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 PTPN11Q06124 597 aaPredicted RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 MARCH8Q5T0T0 291 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 DENND1BQ6P3S1 775 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 RFX6Q8HWS3 928 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 KCTD6Q8NC69 237 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 ST13P5Q8NFI4 369 aaPredicted RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 MGARPQ8TDB4 240 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 KRT35Q92764 455 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 PAWRQ96IZ0 340 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 TWNKQ96RR1 684 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 VPS37BQ9H9H4 285 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 RBM12Q9NTZ6 932 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 DDX43Q9NXZ2 648 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 AIPL1Q9NZN9 384 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 GTF2IRD1Q9UHL9 959 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 RGS16O15492 202 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 C4BPAP04003 597 aaKnown RBP9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 ARL1P40616 181 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 MXRA7P84157 204 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 TLE2Q04725 743 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 MTMR3Q13615 1198 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 MGAT5BQ3V5L5 792 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 DCAF6Q58WW2 860 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 C1orf220Q5T0J3 134 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 CASC4Q6P4E1 433 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 ZNF410Q86VK4 478 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 MAIP1Q8WWC4 291 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 DPF3Q92784 378 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 LRRC1Q9BTT6 524 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 HIPK3Q9H422 1215 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 SLITRK6Q9H5Y7 841 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 PCDHB7Q9Y5E2 793 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 IGKV6D-21A0A0A0MT36 114 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 GRID2IPA4D2P6 1211 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 PGRMC1O00264 195 aaKnown RBP9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 MED7O43513 233 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 IGFBP6P24592 240 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 PLTPP55058 493 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 PPP2R5EQ16537 467 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 FIGNQ5HY92 759 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 TTC19Q6DKK2 380 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 TSHZ1Q6ZSZ6 1077 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 CCNYQ8ND76 341 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 RHOBTB2Q9BYZ6 727 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 SAE1Q9UBE0 346 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 HCSTQ9UBK5 93 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 RGPD3A6NKT7 1758 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 RGPD4Q7Z3J3 1758 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 SMIM35A0A1B0GVV1 85 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 HOXC6P09630 235 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 SPATA31D3P0C874 917 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 TM4SF4P48230 202 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 CRYBB1P53674 252 aaPredicted RBP9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 FMO1Q01740 532 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 MCL1Q07820 350 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 MEA1Q16626 185 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 DCAF4L1Q3SXM0 396 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 SPATA31D4Q6ZUB0 917 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 RSAD2Q8WXG1 361 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 TFAP2BQ92481 460 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 CERS4Q9HA82 394 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 MRFAP1Q9Y605 127 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 ATAD5Q96QE3 1844 aa9.53□□□□□ -0.88
CCDC144B-201ENST00000285176 CYBAP13498 195 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 ATP5DP30049 168 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 RTP1P59025 263 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 HADHQ16836 314 aaKnown RBP9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 RWDD4Q6NW29 188 aaKnown RBP9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 ANKRD42Q8N9B4 389 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 TPCN2Q8NHX9 752 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 TMEM176AQ96HP8 235 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 CABS1Q96KC9 395 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 RNPC3Q96LT9 517 aaKnown RBP9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 ZNF560Q96MR9 790 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 TRIM51Q9BSJ1 452 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 ABCB6Q9NP58 842 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 NFU1Q9UMS0 254 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 SNX24Q9Y343 169 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 DAAM1Q9Y4D1 1078 aa9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 TRIP12Q14669 1992 aaPredicted RBP9.52□□□□□ -0.88
CCDC144B-201ENST00000285176 A0A1B0GUA9 196 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 E5RJQ4 531 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 TULP2O00295 520 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 BNIP3LO60238 219 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 B4GALT4O60513 344 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 SRGAP2BP0DMP2 458 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 GHRHRQ02643 423 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 TAF5Q15542 800 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 FAM171A1Q5VUB5 890 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 CC2D1AQ6P1N0 951 aaPredicted RBP9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 ZNF467Q7Z7K2 595 aaPredicted RBP9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 CTAGE3PQ8IX95 158 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 URGCPQ8TCY9 931 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 CCDC97Q96F63 343 aaPredicted RBP9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 SENP8Q96LD8 212 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 EDEM3Q9BZQ6 932 aa9.52□□□□□ -0.89
CCDC144B-201ENST00000285176 DHX35Q9H5Z1 703 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms