RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 NIPA2Q8N8Q9 360 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 UCMAQ8WVF2 138 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 POMGNT1Q8WZA1 660 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 PAIP2Q9BPZ3 127 aaKnown RBP10.92□□□□□ -0.66
SKA1-201ENST00000285116 SAR1AQ9NR31 198 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 PARVAQ9NVD7 372 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 RLFQ13129 1914 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 TCRBV5S1A1TA0A578 114 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 MAGEA13PA6NCF6 341 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 SMAPO00193 183 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 EDF1O60869 148 aaKnown RBP10.92□□□□□ -0.66
SKA1-201ENST00000285116 LSM8O95777 96 aaKnown RBP10.92□□□□□ -0.66
SKA1-201ENST00000285116 ITGAVP06756 1048 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 TAP1Q03518 808 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 DALRD3Q5D0E6 543 aaKnown RBP10.92□□□□□ -0.66
SKA1-201ENST00000285116 SNX30Q5VWJ9 437 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 C4orf50Q6ZRC1 276 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 TAS1R3Q7RTX0 852 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 SLITRK1Q96PX8 696 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 PDCD2LQ9BRP1 358 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 DHRS4Q9BTZ2 278 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 PXMP2Q9NR77 195 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 TCEAL9Q9UHQ7 104 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 PCDHA10Q9Y5I2 948 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 TYROBPO43914 113 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 TJP3O95049 919 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 NFX1Q12986 1120 aaKnown RBP10.91□□□□□ -0.66
SKA1-201ENST00000285116 CUL2Q13617 745 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 OASLQ15646 514 aaKnown RBP10.91□□□□□ -0.66
SKA1-201ENST00000285116 GPR162Q16538 588 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 SLC45A4Q5BKX6 768 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 EFHC2Q5JST6 749 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 SEPT14Q6ZU15 432 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 SDCCAG8Q86SQ7 713 aaPredicted RBP10.91□□□□□ -0.66
SKA1-201ENST00000285116 FEZF2Q8TBJ5 459 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 CPA5Q8WXQ8 436 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 ATP6V0A1Q93050 837 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 PCDH9Q9HC56 1237 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 PDP2Q9P2J9 529 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 ATP9AO75110 1047 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 DDNO94850 711 aaPredicted RBP10.91□□□□□ -0.66
SKA1-201ENST00000285116 ZWINTO95229 277 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 CBX6O95503 412 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 HLA-DRAP01903 254 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 YBX3P16989 372 aaKnown RBP eCLIP10.91□□□□□ -0.66
SKA1-201ENST00000285116 ADCY1Q08828 1119 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 GRM1Q13255 1194 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 P3H1Q32P28 736 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 KHDC1Q4VXA5 237 aaKnown RBP10.91□□□□□ -0.66
SKA1-201ENST00000285116 RNASEH2BQ5TBB1 312 aaKnown RBP10.91□□□□□ -0.66
SKA1-201ENST00000285116 PCGF5Q86SE9 256 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 C10orf82Q8WW14 230 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 ZBED3Q96IU2 234 aaPredicted RBP10.91□□□□□ -0.66
SKA1-201ENST00000285116 DDX56Q9NY93 547 aaKnown RBP10.91□□□□□ -0.66
SKA1-201ENST00000285116 RANBP2P49792 3224 aaKnown RBP10.91□□□□□ -0.66
SKA1-201ENST00000285116 DOCK1Q14185 1865 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 EXOC1LA0A1B0GW35 172 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 TMEM191CA6NGB0 347 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 PDLIM1O00151 329 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 PEX10O60683 326 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 FAM155BO75949 473 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 VNN1O95497 513 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 IL1BP01584 269 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 TMEM191BP0C7N4 346 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 MMP8P22894 467 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 DSG3P32926 999 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 CACNA2D1P54289 1103 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 TAF1BQ53T94 588 aaPredicted RBP10.91□□□□□ -0.66
SKA1-201ENST00000285116 PLA2G4FQ68DD2 849 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 ARHGAP18Q8N392 663 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 FAM81AQ8TBF8 368 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 SCG3Q8WXD2 468 aaKnown RBP10.91□□□□□ -0.66
SKA1-201ENST00000285116 SYT17Q9BSW7 474 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 ZNF518BQ9C0D4 1074 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 TRABDQ9H4I3 376 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 ZFP69BQ9UJL9 534 aa10.91□□□□□ -0.66
SKA1-201ENST00000285116 NFKBIEO00221 500 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 HNRNPDLO14979 420 aaKnown RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 CDH5P33151 784 aaPredicted RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 AP3M2P53677 418 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 VCPP55072 806 aaKnown RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 SESN3P58005 492 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 SLC34A1Q06495 639 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 TAZQ16635 292 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 LRRC23Q53EV4 343 aaPredicted RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 FOXB2Q5VYV0 432 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 TDRD10Q5VZ19 366 aaKnown RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 SLFN12LQ6IEE8 588 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 POLNQ7Z5Q5 900 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 CCDC125Q86Z20 511 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 PPFIBP2Q8ND30 876 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 GBP5Q96PP8 586 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 TAAR1Q96RJ0 339 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 TUBB6Q9BUF5 446 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 PPP1R12CQ9BZL4 782 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 DMAP1Q9NPF5 467 aaPredicted RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 PCMTD2Q9NV79 361 aa10.9□□□□□ -0.66
SKA1-201ENST00000285116 PSMC3IPQ9P2W1 217 aaPredicted RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 FARP1Q9Y4F1 1045 aaPredicted RBP10.9□□□□□ -0.66
SKA1-201ENST00000285116 COL11A1P12107 1806 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms