RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 LONP2Q86WA8 852 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 CDR2LQ86X02 465 aaPredicted RBP23.31■■□□□ 1.32
CDR2-201ENST00000268383 JOSD2Q8TAC2 188 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 TCHPQ9BT92 498 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 TBC1D10AQ9BXI6 508 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 SLC5A4Q9NY91 659 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 RABGEF1Q9UJ41 708 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 STYXL1Q9Y6J8 313 aa23.31■■□□□ 1.32
CDR2-201ENST00000268383 TCRBV5S1A1TA0A578 114 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 HMGCS2P54868 508 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 RTP1P59025 263 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 TAF5Q15542 800 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 XKR3Q5GH77 459 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 KIAA0319LQ8IZA0 1049 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 ARFGAP1Q8N6T3 406 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 TTLL6Q8N841 843 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 FAM13CQ8NE31 585 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 TTC8Q8TAM2 541 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 CISHQ9NSE2 258 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 AGTPBP1Q9UPW5 1226 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 SUPT20HL2P0C7V6 817 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 OSTNP61366 133 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 CCDC15Q0P6D6 951 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 CCDC142Q17RM4 750 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 SUPT20HL1Q3ZLR7 823 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 C3orf62Q6ZUJ4 267 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 MTDHQ86UE4 582 aaKnown RBP23.3■■□□□ 1.32
CDR2-201ENST00000268383 RFWD2Q8NHY2 731 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 TTC25Q96NG3 672 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 PORCNQ9H237 461 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 PSMC3IPQ9P2W1 217 aaPredicted RBP23.3■■□□□ 1.32
CDR2-201ENST00000268383 PCSK1NQ9UHG2 260 aa23.3■■□□□ 1.32
CDR2-201ENST00000268383 CST8O60676 142 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 TMEM132BQ14DG7 1078 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 NBPF12Q5TAG4 269 aaPredicted RBP23.29■■□□□ 1.32
CDR2-201ENST00000268383 PYROXD1Q8WU10 500 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 CPT1BQ92523 772 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 CNTN6Q9UQ52 1028 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 TBXAS1P24557 533 aaPredicted RBP23.29■■□□□ 1.32
CDR2-201ENST00000268383 RAP1GAPP47736 663 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 ZNF132P52740 706 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 TGFB2P61812 414 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 BBS9Q3SYG4 887 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 TRIM68Q6AZZ1 485 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 TDRPQ86YL5 185 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 TCP10LQ8TDR4 215 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 PTPRN2Q92932 1015 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 LRMDAQ9H2I8 198 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 ZNRF3Q9ULT6 936 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 NFASCO94856 1347 aa23.29■■□□□ 1.32
CDR2-201ENST00000268383 C2orf71A6NGG8 1288 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 ENTPD5O75356 428 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 CRYMQ14894 314 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 FBXO36Q8NEA4 188 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 PRR11Q96HE9 360 aaPredicted RBP23.28■■□□□ 1.32
CDR2-201ENST00000268383 ZBED3Q96IU2 234 aaPredicted RBP23.28■■□□□ 1.32
CDR2-201ENST00000268383 PAFAH2Q99487 392 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 ZNF302Q9NR11 478 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 ZNF214Q9UL59 606 aaPredicted RBP23.28■■□□□ 1.32
CDR2-201ENST00000268383 TMEM63AO94886 807 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 SKIV2L2P42285 1042 aaKnown RBP23.28■■□□□ 1.32
CDR2-201ENST00000268383 DENND1BQ6P3S1 775 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 NLRP9Q7RTR0 991 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 SAMD7Q7Z3H4 446 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 CCDC125Q86Z20 511 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 UNC45BQ8IWX7 931 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 NIM1KQ8IY84 436 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 IMPG2Q9BZV3 1241 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 CYTH4Q9UIA0 394 aa23.28■■□□□ 1.32
CDR2-201ENST00000268383 SMG5Q9UPR3 1016 aaKnown RBP23.28■■□□□ 1.32
CDR2-201ENST00000268383 C3orf70A6NLC5 250 aaPredicted RBP23.27■■□□□ 1.32
CDR2-201ENST00000268383 PEX11AO75192 247 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 PSMA2P25787 234 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 GEMIN4P57678 1058 aaKnown RBP23.27■■□□□ 1.32
CDR2-201ENST00000268383 CNTN2Q02246 1040 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 NR1H3Q13133 447 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 CAPSQ13938 189 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 FOXP3Q9BZS1 431 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 CYP39A1Q9NYL5 469 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 KANSL3Q9P2N6 904 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 ADGRA2Q96PE1 1338 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 ASS1P00966 412 aaKnown RBP23.27■■□□□ 1.32
CDR2-201ENST00000268383 OATP04181 439 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 RPL22P35268 128 aaKnown RBP23.27■■□□□ 1.32
CDR2-201ENST00000268383 DRICH1Q6PGQ1 229 aaPredicted RBP23.27■■□□□ 1.32
CDR2-201ENST00000268383 IGDCC3Q8IVU1 814 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 SLC35B2Q8TB61 432 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 RAB3IPQ96QF0 476 aaPredicted RBP23.27■■□□□ 1.32
CDR2-201ENST00000268383 PCDH9Q9HC56 1237 aa23.27■■□□□ 1.32
CDR2-201ENST00000268383 DRG1Q9Y295 367 aaKnown RBP23.27■■□□□ 1.32
CDR2-201ENST00000268383 FARP1Q9Y4F1 1045 aaPredicted RBP23.27■■□□□ 1.32
CDR2-201ENST00000268383 ITGAVP06756 1048 aa23.26■■□□□ 1.31
CDR2-201ENST00000268383 TFAMQ00059 246 aaKnown RBP23.26■■□□□ 1.31
CDR2-201ENST00000268383 PTPN20Q4JDL3 420 aa23.26■■□□□ 1.31
CDR2-201ENST00000268383 LRRC6Q86X45 466 aa23.26■■□□□ 1.31
CDR2-201ENST00000268383 UBR7Q8N806 425 aa23.26■■□□□ 1.31
CDR2-201ENST00000268383 REPS2Q8NFH8 660 aa23.26■■□□□ 1.31
CDR2-201ENST00000268383 DHX33Q9H6R0 707 aaKnown RBP23.26■■□□□ 1.31
CDR2-201ENST00000268383 GINM1Q9NU53 330 aa23.26■■□□□ 1.31
CDR2-201ENST00000268383 NXF1Q9UBU9 619 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms