RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 TBXAS1P24557 533 aaPredicted RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 HOXA7P31268 230 aaPredicted RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 ELMOD1Q8N336 334 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 POLR3FQ9H1D9 316 aaPredicted RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 CTNNAL1Q9UBT7 734 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 C3orf70A6NLC5 250 aaPredicted RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 PRPF3O43395 683 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 TUBA4AP68366 448 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 TRAF2Q12933 501 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 PADI6Q6TGC4 694 aa11.6□□□□□ -0.55
CHFR-201ENST00000266880 UTP15Q8TED0 518 aaKnown RBP11.6□□□□□ -0.55
CHFR-201ENST00000266880 SNRPAP09012 282 aaKnown RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 SULT1E1P49888 294 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 MCEEQ96PE7 176 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 FAM111AQ96PZ2 611 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 PUS7LQ9H0K6 701 aaKnown RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 NFICP08651 508 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 PSMC5P62195 406 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 DDX53Q86TM3 631 aaKnown RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 CPA5Q8WXQ8 436 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 IP6K1Q92551 441 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 MYCP01106 439 aaPredicted RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 NR1D2Q14995 579 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 TSNQ15631 228 aaKnown RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 POTEGQ6S5H5 508 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 SSH3Q8TE77 659 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 CCSER1Q9C0I3 900 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 SH3GLB1Q9Y371 365 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 PLXNC1O60486 1568 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 MED26O95402 600 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 ATP6V1G2O95670 118 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 JAK1P23458 1154 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 RFC5P40937 340 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 YWHAZP63104 245 aaKnown RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 IPMKQ8NFU5 416 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 ZFRQ96KR1 1074 aaKnown RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 FAM217BQ9NTX9 383 aaPredicted RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 HIST1H2AGP0C0S8 130 aaPredicted RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 ARF4P18085 180 aaPredicted RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 HIST1H2ADP20671 130 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 TRIM72Q6ZMU5 477 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 ARID3BQ8IVW6 561 aaPredicted RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 HIST1H2AHQ96KK5 128 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 FAM129BQ96TA1 746 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 HIST1H2AJQ99878 128 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 H2AFJQ9BTM1 129 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 IRX2Q9BZI1 471 aaPredicted RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 RAPGEF6Q8TEU7 1601 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 IQCMA0A1B0GVH7 501 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 CDC16Q13042 620 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 ACAP1Q15027 740 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 CELF4Q9BZC1 486 aaKnown RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 RIC8BQ9NVN3 520 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 PGM3O95394 542 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 PTPN7P35236 360 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 TCHHL1Q5QJ38 904 aaPredicted RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 TMEM63BQ5T3F8 832 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 COMMD2Q86X83 199 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 JAMLQ86YT9 394 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 ATP10DQ9P241 1426 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 CDC25CP30307 473 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 STAT3P40763 770 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 RABGEF1Q9UJ41 708 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 VAV3Q9UKW4 847 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 EMSYQ7Z589 1322 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 PEG3Q9GZU2 1588 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 HSD17B3P37058 310 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 CASP5P51878 434 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 CUL4AQ13619 759 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 DDX39BQ13838 428 aaKnown RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 PKN2Q16513 984 aaKnown RBP11.59□□□□□ -0.55
CHFR-201ENST00000266880 GJB4Q9NTQ9 266 aa11.59□□□□□ -0.55
CHFR-201ENST00000266880 PSIP1O75475 530 aaKnown RBP11.58□□□□□ -0.55
CHFR-201ENST00000266880 CYP21A2P08686 494 aa11.58□□□□□ -0.55
CHFR-201ENST00000266880 AKAP5P24588 427 aa11.58□□□□□ -0.55
CHFR-201ENST00000266880 CDC73Q6P1J9 531 aa11.58□□□□□ -0.55
CHFR-201ENST00000266880 PFASO15067 1338 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 NPHP3-ACAD11A0A0J9YXS1 232 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 CLRN2A0PK11 232 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 ASMTLO95671 621 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 MZF1P28698 734 aaPredicted RBP11.58□□□□□ -0.56
CHFR-201ENST00000266880 SCFD2Q8WU76 684 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 RAD23AP54725 363 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 KNOP1Q1ED39 458 aaKnown RBP11.58□□□□□ -0.56
CHFR-201ENST00000266880 KBTBD2Q8IY47 623 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 MYCBPAPQ8TBZ2 947 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 ABCB11O95342 1321 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 STK25O00506 426 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 MTDHQ86UE4 582 aaKnown RBP11.58□□□□□ -0.56
CHFR-201ENST00000266880 TMEM117Q9H0C3 514 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 CYP26A1O43174 497 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 ATF4P18848 351 aaPredicted RBP11.58□□□□□ -0.56
CHFR-201ENST00000266880 C1DQ13901 141 aaKnown RBP11.58□□□□□ -0.56
CHFR-201ENST00000266880 BEST2Q8NFU1 509 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 ZNF496Q96IT1 587 aaPredicted RBP11.58□□□□□ -0.56
CHFR-201ENST00000266880 MAGEB18Q96M61 343 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 BABAM1Q9NWV8 329 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 NINQ8N4C6 2090 aa11.58□□□□□ -0.56
CHFR-201ENST00000266880 DENND3A2RUS2 1198 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms