RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 GRID1Q9ULK0 1009 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 ZMYND8Q9ULU4 1186 aaPredicted RBP13.12□□□□□ -0.31
BEST3-201ENST00000266661 EFR3BQ9Y2G0 817 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 STARD13Q9Y3M8 1113 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 C19orf81C9J6K1 198 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 IGF2BP3O00425 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
BEST3-201ENST00000266661 TYROBPO43914 113 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 MSCO60682 206 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 GJC1P36383 396 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 CETN2P41208 172 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 TNFSF9P41273 254 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 HMGCS2P54868 508 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 GPX6P59796 221 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 IL9RQ01113 521 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 TAP1Q03518 808 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 MOGSQ13724 837 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 PIGHQ14442 188 aaPredicted RBP13.12□□□□□ -0.31
BEST3-201ENST00000266661 TMED2Q15363 201 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 PKN2Q16513 984 aaKnown RBP13.12□□□□□ -0.31
BEST3-201ENST00000266661 SEZ6Q53EL9 994 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 ZC3H12AQ5D1E8 599 aaKnown RBP13.12□□□□□ -0.31
BEST3-201ENST00000266661 TFDP3Q5H9I0 405 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 LDLRAD1Q5T700 205 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 GSTA5Q7RTV2 222 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 PPCSQ9HAB8 311 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 FETUBQ9UGM5 382 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 SHOC2Q9UQ13 582 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 ZNF148Q9UQR1 794 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 PTPRFP10586 1907 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
BEST3-201ENST00000266661 KRT16P08779 473 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 EIF4BP23588 611 aaKnown RBP13.11□□□□□ -0.31
BEST3-201ENST00000266661 BRD2P25440 801 aaKnown RBP13.11□□□□□ -0.31
BEST3-201ENST00000266661 IREB2P48200 963 aaKnown RBP13.11□□□□□ -0.31
BEST3-201ENST00000266661 ZNF157P51786 506 aaPredicted RBP13.11□□□□□ -0.31
BEST3-201ENST00000266661 MYL6P60660 151 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 GPS1Q13098 491 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 ZKSCAN8Q15776 578 aaPredicted RBP13.11□□□□□ -0.31
BEST3-201ENST00000266661 EFHC2Q5JST6 749 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 DCAF15Q66K64 600 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 KAZNQ674X7 775 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 POLNQ7Z5Q5 900 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 TMEM35BQ8NCS4 154 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 DNERQ8NFT8 737 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 MCEEQ96PE7 176 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 DHRS4Q9BTZ2 278 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 XYLT2Q9H1B5 865 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 CYLDQ9NQC7 956 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 CISHQ9NSE2 258 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 DDX56Q9NY93 547 aaKnown RBP13.11□□□□□ -0.31
BEST3-201ENST00000266661 ANKFY1Q9P2R3 1169 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 BAIAP2L1Q9UHR4 511 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 SLC24A2Q9UI40 661 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.11□□□□□ -0.31
BEST3-201ENST00000266661 SNCAIPQ9Y6H5 919 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 MYH9P35579 1960 aaKnown RBP13.11□□□□□ -0.31
BEST3-201ENST00000266661 CLUHO75153 1309 aa13.11□□□□□ -0.31
BEST3-201ENST00000266661 EXOC1LA0A1B0GW35 172 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 AOC2O75106 756 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 MAFO75444 373 aaPredicted RBP13.1□□□□□ -0.31
BEST3-201ENST00000266661 GJA5P36382 358 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 SSR1P43307 286 aaKnown RBP13.1□□□□□ -0.31
BEST3-201ENST00000266661 YARSP54577 528 aaKnown RBP13.1□□□□□ -0.31
BEST3-201ENST00000266661 SLC25A11Q02978 314 aaKnown RBP13.1□□□□□ -0.31
BEST3-201ENST00000266661 STXBP2Q15833 593 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 PDK4Q16654 411 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 DEFB115Q30KQ5 88 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 CDCA2Q69YH5 1023 aaPredicted RBP13.1□□□□□ -0.31
BEST3-201ENST00000266661 DNAJC24Q6P3W2 148 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 ZNF276Q8N554 614 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 AGAP11Q8TF27 550 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 SLC7A3Q8WY07 619 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 WDR83Q9BRX9 315 aaKnown RBP13.1□□□□□ -0.31
BEST3-201ENST00000266661 NIF3L1Q9GZT8 377 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 TRABDQ9H4I3 376 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 SSU72Q9NP77 194 aaKnown RBP13.1□□□□□ -0.31
BEST3-201ENST00000266661 SENP1Q9P0U3 644 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 CPSF3Q9UKF6 684 aaKnown RBP13.1□□□□□ -0.31
BEST3-201ENST00000266661 SMG5Q9UPR3 1016 aaKnown RBP13.1□□□□□ -0.31
BEST3-201ENST00000266661 CENPFP49454 3210 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 E7ESA3 106 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 SPAG7O75391 227 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 UNC5CO95185 931 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 EDNRBP24530 442 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 CBLBQ13191 982 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 E2F5Q15329 346 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 SLC1A5Q15758 541 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 GPAT2Q6NUI2 795 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 CEP57Q86XR8 500 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 ANKRD13AQ8IZ07 590 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 KIAA0319LQ8IZA0 1049 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 MZB1Q8WU39 189 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 UTP4Q969X6 686 aaKnown RBP13.1□□□□□ -0.31
BEST3-201ENST00000266661 KLHL29Q96CT2 875 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 ACO2Q99798 780 aaKnown RBP13.1□□□□□ -0.31
BEST3-201ENST00000266661 PITPNM3Q9BZ71 974 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 KIF9Q9HAQ2 790 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 KLHL14Q9P2G3 628 aa13.1□□□□□ -0.31
BEST3-201ENST00000266661 RABGEF1Q9UJ41 708 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms