RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 COL16A1Q07092 1604 aaPredicted RBP13.19□□□□□ -0.3
HERC6-201ENST00000264346 ASB14A6NK59 587 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 RFC1P35251 1148 aaPredicted RBP13.19□□□□□ -0.3
HERC6-201ENST00000264346 DCAF12L1Q5VU92 463 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 C9orf131Q5VYM1 1079 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 DUPD1Q68J44 220 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 PPP1R2P3Q6NXS1 205 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 ABHD15Q6UXT9 468 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 DSTYKQ6XUX3 929 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 NETO2Q8NC67 525 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
HERC6-201ENST00000264346 NCANO14594 1321 aa13.19□□□□□ -0.3
HERC6-201ENST00000264346 HUS1O60921 280 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 SSTR1P30872 391 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 ARPP19P56211 112 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 RBP5P82980 135 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 AP1B1Q10567 949 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 DENND1BQ6P3S1 775 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 FAM43BQ6ZT52 329 aaPredicted RBP13.18□□□□□ -0.3
HERC6-201ENST00000264346 KDELC2Q7Z4H8 507 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 SAMD3Q8N6K7 520 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 TTC13Q8NBP0 860 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 OSMRQ99650 979 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 FHDC1Q9C0D6 1143 aaPredicted RBP13.18□□□□□ -0.3
HERC6-201ENST00000264346 SLC40A1Q9NP59 571 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 SMCHD1A6NHR9 2005 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 SPATA31C2B4DYI2 1134 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 LGR5O75473 907 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 MAMLD1Q13495 774 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 GOLGA7BQ2TAP0 167 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 PAN2Q504Q3 1202 aaKnown RBP13.18□□□□□ -0.3
HERC6-201ENST00000264346 SPOCD1Q6ZMY3 1216 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 ATP11CQ8NB49 1132 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 NT5C1AQ9BXI3 368 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 SIK2Q9H0K1 926 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 SMYD3Q9H7B4 428 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 ACTR5Q9H9F9 607 aaPredicted RBP13.18□□□□□ -0.3
HERC6-201ENST00000264346 L3MBTL1Q9Y468 752 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 GOLGA4Q13439 2230 aaKnown RBP13.18□□□□□ -0.3
HERC6-201ENST00000264346 TTC4O95801 387 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 GH1P01241 217 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 AKAP5P24588 427 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 ADCYAP1R1P41586 468 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 AP3M2P53677 418 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 TMPRSS15P98073 1019 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 STAT4Q14765 748 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 CCDC14Q49A88 953 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 RWDD4Q6NW29 188 aaKnown RBP13.18□□□□□ -0.3
HERC6-201ENST00000264346 SPATA21Q7Z572 469 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 BEST2Q8NFU1 509 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 AGR3Q8TD06 166 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 CEP41Q9BYV8 373 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 KIF9Q9HAQ2 790 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 NPHS2Q9NP85 383 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 PRMT7Q9NVM4 692 aaPredicted RBP13.18□□□□□ -0.3
HERC6-201ENST00000264346 DDX56Q9NY93 547 aaKnown RBP13.18□□□□□ -0.3
HERC6-201ENST00000264346 BTBD7Q9P203 1132 aa13.18□□□□□ -0.3
HERC6-201ENST00000264346 FNDC3AQ9Y2H6 1198 aaKnown RBP13.18□□□□□ -0.3
HERC6-201ENST00000264346 EP400Q96L91 3159 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 ARHGAP42A6NI28 874 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 BTNL10A8MVZ5 291 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 CES2O00748 559 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 COPEO14579 308 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 ZC3H11AO75152 810 aaKnown RBP eCLIP13.17□□□□□ -0.3
HERC6-201ENST00000264346 CSPG5O95196 566 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 NFICP08651 508 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 PECAM1P16284 738 aaPredicted RBP13.17□□□□□ -0.3
HERC6-201ENST00000264346 TFDP3Q5H9I0 405 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 MDH1BQ5I0G3 518 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 PCGF5Q86SE9 256 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 BRSK2Q8IWQ3 736 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 GPRC5AQ8NFJ5 357 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 CRYGNQ8WXF5 182 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 CDCA5Q96FF9 252 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 RSRC1Q96IZ7 334 aaKnown RBP13.17□□□□□ -0.3
HERC6-201ENST00000264346 GCOM2Q9BZD3 368 aaPredicted RBP13.17□□□□□ -0.3
HERC6-201ENST00000264346 KLC2Q9H0B6 622 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 ECT2Q9H8V3 914 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 NAALADL1Q9UQQ1 740 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 LACTBL1A8MY62 500 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 CALRP27797 417 aaKnown RBP13.17□□□□□ -0.3
HERC6-201ENST00000264346 DNERQ8NFT8 737 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 DEPDC1BQ8WUY9 529 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 SPON1Q9HCB6 807 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 CPSF2Q9P2I0 782 aaKnown RBP13.17□□□□□ -0.3
HERC6-201ENST00000264346 H3BRB1 525 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 PLA2G6O60733 806 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 BAG2O95816 211 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 SLC25A27O95847 323 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 CYP2C9P11712 490 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 KRT4P19013 534 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 PTPN11Q06124 597 aaPredicted RBP13.17□□□□□ -0.3
HERC6-201ENST00000264346 GEN1Q17RS7 908 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 C15orf59Q2T9L4 293 aaPredicted RBP13.17□□□□□ -0.3
HERC6-201ENST00000264346 JADE1Q6IE81 842 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 SCUBE3Q8IX30 993 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 DCLK2Q8N568 766 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 RXFP2Q8WXD0 754 aa13.17□□□□□ -0.3
HERC6-201ENST00000264346 ZNF516Q92618 1163 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms