RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ZNF558Q96NG5 402 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 SLC9A7Q96T83 725 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 EIF3CQ99613 913 aaKnown RBP10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 RAD9AQ99638 391 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 CRTAC1Q9NQ79 661 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 INSL6Q9Y581 213 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 PDE4DIPQ5VU43 2346 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 MYBPHLA2RUH7 354 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 CLDN5O00501 218 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 TRAPPC3O43617 180 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 CYP11A1P05108 521 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 OR4Q2P0C623 313 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 VDRP11473 427 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 TYMPP19971 482 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 ADORA2BP29275 332 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 LHX1P48742 406 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 BMS1Q14692 1282 aaKnown RBP10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 SLC18A3Q16572 532 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 SGO2Q562F6 1265 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 MDH1BQ5I0G3 518 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 RTP2Q5QGT7 225 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 ALKBH5Q6P6C2 394 aaKnown RBP10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 PRSS55Q6UWB4 352 aaPredicted RBP10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 PHLDB2Q86SQ0 1253 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 LRRTM3Q86VH5 581 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 UNC93AQ86WB7 457 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 FMNL3Q8IVF7 1028 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 CRYBG2Q8N1P7 616 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 SLC39A11Q8N1S5 342 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 WDTC1Q8N5D0 677 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 B3GALNT2Q8NCR0 500 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 OR10T2Q8NGX3 314 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 PHOSPHO2Q8TCD6 241 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 SYT15Q9BQS2 421 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 RHOBTB2Q9BYZ6 727 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 UBE2OQ9C0C9 1292 aaKnown RBP10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 PDCL3Q9H2J4 239 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 OCEL1Q9H607 264 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 TMLHEQ9NVH6 421 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 TRIM10Q9UDY6 481 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 NAGPAQ9UK23 515 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 GTF3C4Q9UKN8 822 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 NENFQ9UMX5 172 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 PPP2R2CQ9Y2T4 447 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 PCDHA13Q9Y5I0 950 aa10.35□□□□□ -0.75
SNRNP40-201ENST00000263694 NLRC5Q86WI3 1866 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 PLXNA4Q9HCM2 1894 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 O00370 1275 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 C2CD2LO14523 706 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 MICAL2O94851 1124 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 LCA5LO95447 670 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 EFEMP2O95967 443 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 RPL17P18621 184 aaKnown RBP10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 LAG3P18627 525 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 FGFR3P22607 806 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 MAGEA1P43355 309 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 YWHAHQ04917 246 aaPredicted RBP10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 SPA17Q15506 151 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 CLEC16AQ2KHT3 1053 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 GOLGA7BQ2TAP0 167 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 VARS2Q5ST30 1063 aaKnown RBP10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 NAA35Q5VZE5 725 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 RSPO2Q6UXX9 243 aaPredicted RBP10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 VPS36Q86VN1 386 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 REXO1L1PQ8IX06 675 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 TTC39CQ8N584 583 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 SLC2A14Q8TDB8 520 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 AUTS2Q8WXX7 1259 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 GDF15Q99988 308 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 LACRTQ9GZZ8 138 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 MTIF3Q9H2K0 278 aaKnown RBP10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 SPG21Q9NZD8 308 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 CHORDC1Q9UHD1 332 aaPredicted RBP10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 CYTH4Q9UIA0 394 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 TSPAN16Q9UKR8 245 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 MTUS1Q9ULD2 1270 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 DUSP10Q9Y6W6 482 aa10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 RANBP2P49792 3224 aaKnown RBP10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 SF3B1O75533 1304 aaKnown RBP eCLIP10.34□□□□□ -0.758e-6■■■□□ 17.8
SNRNP40-201ENST00000263694 TNRC18O15417 2968 aaPredicted RBP10.34□□□□□ -0.75
SNRNP40-201ENST00000263694 M0QYV0 167 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 TULP2O00295 520 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 CSPG5O95196 566 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 FTLP02792 175 aaPredicted RBP10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 CYP1A1P04798 512 aaPredicted RBP10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 FAM163BP0C2L3 166 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 UNGP13051 313 aaPredicted RBP10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 ABCB4P21439 1286 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 PBX2P40425 430 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 ARPP19P56211 112 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 CNGA2Q16280 664 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 LLGL2Q6P1M3 1020 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 PAQR9Q6ZVX9 377 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 ZSCAN30Q86W11 494 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 TTC30AQ86WT1 665 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 ZNF677Q86XU0 584 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 CCAR2Q8N163 923 aaKnown RBP10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 THEM5Q8N1Q8 247 aa10.33□□□□□ -0.76
SNRNP40-201ENST00000263694 KLHL23Q8NBE8 558 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms