RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PSMC1P62191 440 aaKnown RBP14.35□□□□□ -0.11
VMP1-201ENST00000262291 MSL3Q8N5Y2 521 aaKnown RBP14.35□□□□□ -0.11
VMP1-201ENST00000262291 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.35□□□□□ -0.11
VMP1-201ENST00000262291 TMEM176AQ96HP8 235 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 MRPL45Q9BRJ2 306 aaKnown RBP14.35□□□□□ -0.11
VMP1-201ENST00000262291 ASB7Q9H672 318 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 SLC24A3Q9HC58 644 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 PARP2Q9UGN5 583 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 GABRQQ9UN88 632 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 SCINQ9Y6U3 715 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 GOLGA6CA6NDK9 693 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 BHMG1C9JSJ3 638 aaPredicted RBP14.35□□□□□ -0.11
VMP1-201ENST00000262291 CILPO75339 1184 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 RECQL4O94761 1208 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 GOLGA6DP0CG33 693 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 DARSP14868 501 aaKnown RBP14.35□□□□□ -0.11
VMP1-201ENST00000262291 CHRNA3P32297 505 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 RAB6CQ53S08 254 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 KCNT1Q5JUK3 1230 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 CEP85LQ5SZL2 805 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 ZNF410Q86VK4 478 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 IQCKQ8N0W5 287 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 CCDC114Q96M63 670 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 RAB6CQ9H0N0 254 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 ZWILCHQ9H900 591 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 GOLGA6AQ9NYA3 693 aa14.35□□□□□ -0.11
VMP1-201ENST00000262291 ZSWIM8A7E2V4 1837 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 CALB1P05937 261 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 IGFBP6P24592 240 aaPredicted RBP14.34□□□□□ -0.11
VMP1-201ENST00000262291 HSPA9P38646 679 aaKnown RBP14.34□□□□□ -0.11
VMP1-201ENST00000262291 RGS2P41220 211 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 GRM5P41594 1212 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 RBP5P82980 135 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 NNTQ13423 1086 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 PPP1R7Q15435 360 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 FSCN1Q16658 493 aaKnown RBP14.34□□□□□ -0.11
VMP1-201ENST00000262291 ZDHHC24Q6UX98 284 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 CXCL17Q6UXB2 119 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 ACOT1Q86TX2 421 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 RHOT1Q8IXI2 618 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 USP6NLQ92738 828 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 RAB17Q9H0T7 212 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 METTL5Q9NRN9 209 aaKnown RBP14.34□□□□□ -0.11
VMP1-201ENST00000262291 TCRBV5S1A1TA0A578 114 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 FSCN2O14926 492 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 KRT1P04264 644 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 CTSHP09668 335 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 EIF4BP23588 611 aaKnown RBP14.34□□□□□ -0.11
VMP1-201ENST00000262291 SLC1A1P43005 524 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 SNX17Q15036 470 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 SLC27A1Q6PCB7 646 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 CCDC25Q86WR0 208 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 VCPIP1Q96JH7 1222 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 FMO2Q99518 471 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 FAM107BQ9H098 131 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 GRHL1Q9NZI5 618 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.34□□□□□ -0.11
VMP1-201ENST00000262291 NME7Q9Y5B8 376 aa14.34□□□□□ -0.11
VMP1-201ENST00000262291 LSM8O95777 96 aaKnown RBP14.33□□□□□ -0.12
VMP1-201ENST00000262291 ATP1A2P50993 1020 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 YWHAEP62258 255 aaKnown RBP14.33□□□□□ -0.12
VMP1-201ENST00000262291 CAP1Q01518 475 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 ALS2CLQ60I27 953 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 MFSD7Q6UXD7 560 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 TMC3Q7Z5M5 1100 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 FAM76AQ8TAV0 307 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 RAPGEF5Q92565 580 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 PIWIL1Q96J94 861 aaKnown RBP14.33□□□□□ -0.12
VMP1-201ENST00000262291 PWWP2AQ96N64 755 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 FAM114A2Q9NRY5 505 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 BCCIPQ9P287 314 aaKnown RBP eCLIP14.33□□□□□ -0.12
VMP1-201ENST00000262291 PCSK1NQ9UHG2 260 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 IP6K2Q9UHH9 426 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 MBLAC1A4D2B0 266 aaPredicted RBP14.33□□□□□ -0.12
VMP1-201ENST00000262291 PDGFRBP09619 1106 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 PSMA2P25787 234 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 KRT17Q04695 432 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 DHX34Q14147 1143 aaKnown RBP14.33□□□□□ -0.12
VMP1-201ENST00000262291 FAM47CQ5HY64 1035 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 GNASQ5JWF2 1037 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 ZNF618Q5T7W0 954 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 NOTUMQ6P988 496 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 C7orf31Q8N865 590 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 N4BP2L2Q92802 583 aaPredicted RBP14.33□□□□□ -0.12
VMP1-201ENST00000262291 APBA2Q99767 749 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 OSBPL8Q9BZF1 889 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 DPEP3Q9H4B8 488 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 C10orf88Q9H8K7 445 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 ZFYVE28Q9HCC9 887 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 ZDHHC18Q9NUE0 388 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 PCDHGC3Q9UN70 934 aa14.33□□□□□ -0.12
VMP1-201ENST00000262291 SMIM23A6NLE4 172 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 MEIS3P2A8K0S8 358 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 KRT3P12035 628 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 PAX7P23759 505 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 CPT1AP50416 773 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 DYNLT1P63172 113 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 GNGT1P63211 74 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 TAF5Q15542 800 aa14.32□□□□□ -0.12
VMP1-201ENST00000262291 CCDC142Q17RM4 750 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms