RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 SWSAP1Q6NVH7 229 aa18.36■□□□□ 0.53
TRAM1-201ENST00000262213 PALM2Q8IXS6 379 aa18.36■□□□□ 0.53
TRAM1-201ENST00000262213 VPS52Q8N1B4 723 aa18.36■□□□□ 0.53
TRAM1-201ENST00000262213 FBXO36Q8NEA4 188 aa18.36■□□□□ 0.53
TRAM1-201ENST00000262213 MCUR1Q96AQ8 359 aa18.36■□□□□ 0.53
TRAM1-201ENST00000262213 PPP1R12CQ9BZL4 782 aa18.36■□□□□ 0.53
TRAM1-201ENST00000262213 ANKEF1Q9NU02 776 aa18.36■□□□□ 0.53
TRAM1-201ENST00000262213 SLC24A2Q9UI40 661 aa18.36■□□□□ 0.53
TRAM1-201ENST00000262213 ZNF541Q9H0D2 1346 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 TCRBV7S3A2A0A539 114 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 C4BPAP04003 597 aaKnown RBP18.35■□□□□ 0.53
TRAM1-201ENST00000262213 RFC5P40937 340 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 DNAJC24Q6P3W2 148 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 C15orf39Q6ZRI6 1047 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 TTC7BQ86TV6 843 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 POLR3FQ9H1D9 316 aaPredicted RBP18.35■□□□□ 0.53
TRAM1-201ENST00000262213 PIDD1Q9HB75 910 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 ARMCX1Q9P291 453 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 E7ENQ6 273 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 BRD2P25440 801 aaKnown RBP18.35■□□□□ 0.53
TRAM1-201ENST00000262213 JAK3P52333 1124 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 ARFIP2P53365 341 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 KLC1Q07866 573 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 EFHC2Q5JST6 749 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 SNX30Q5VWJ9 437 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 PHF13Q86YI8 300 aaPredicted RBP18.35■□□□□ 0.53
TRAM1-201ENST00000262213 TSSK1BQ9BXA7 367 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 TRIM55Q9BYV6 548 aa18.35■□□□□ 0.53
TRAM1-201ENST00000262213 hCG_1818297A0A087WSY0 165 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 PTGER2P43116 358 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 RCN2Q14257 317 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 OASLQ15646 514 aaKnown RBP18.34■□□□□ 0.53
TRAM1-201ENST00000262213 ACSBG2Q5FVE4 666 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 MDH1BQ5I0G3 518 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 ARHGEF16Q5VV41 709 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 RINLQ6ZS11 566 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 OR5B17Q8NGF7 314 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 ZNF606Q8WXB4 792 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 TMEM120AQ9BXJ8 343 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 AGO2Q9UKV8 859 aaKnown RBP18.34■□□□□ 0.53
TRAM1-201ENST00000262213 CHMP2BQ9UQN3 213 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 TMEM191CA6NGB0 347 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 CAPN9O14815 690 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 EXTL3O43909 919 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 CCDC22O60826 627 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 TMEM191BP0C7N4 346 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 OTUD4Q01804 1114 aaKnown RBP18.34■□□□□ 0.53
TRAM1-201ENST00000262213 MTERF2Q49AM1 385 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 TFDP3Q5H9I0 405 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 NIPA1Q7RTP0 329 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 ZC3H18Q86VM9 953 aaKnown RBP18.34■□□□□ 0.53
TRAM1-201ENST00000262213 MCF2L2Q86YR7 1114 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 NRG4Q8WWG1 115 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 TMEM143Q96AN5 459 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 ANKRD27Q96NW4 1050 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 FAM111AQ96PZ2 611 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 TSC22D3Q99576 134 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 BTBD10Q9BSF8 475 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 RBAKQ9NYW8 714 aaPredicted RBP18.34■□□□□ 0.53
TRAM1-201ENST00000262213 STOML1Q9UBI4 398 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 ZNF70Q9UC06 446 aaPredicted RBP18.34■□□□□ 0.53
TRAM1-201ENST00000262213 SHOC2Q9UQ13 582 aa18.34■□□□□ 0.53
TRAM1-201ENST00000262213 BGNP21810 368 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 GARTP22102 1010 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 PHBP35232 272 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 SLC18A1P54219 525 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 ARL4CP56559 192 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 MRPS35P82673 323 aaKnown RBP18.33■□□□□ 0.53
TRAM1-201ENST00000262213 C1QBPQ07021 282 aaKnown RBP18.33■□□□□ 0.53
TRAM1-201ENST00000262213 TRIM72Q6ZMU5 477 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 ATP11CQ8NB49 1132 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 ACTL9Q8TC94 416 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 WDR60Q8WVS4 1066 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 CPT1BQ92523 772 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 WDR83Q9BRX9 315 aaKnown RBP18.33■□□□□ 0.53
TRAM1-201ENST00000262213 XPNPEP1Q9NQW7 623 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 SYNPO2Q9UMS6 1093 aa18.33■□□□□ 0.53
TRAM1-201ENST00000262213 TRAFD1O14545 582 aaPredicted RBP18.33■□□□□ 0.52
TRAM1-201ENST00000262213 GSC2O15499 205 aa18.33■□□□□ 0.52
TRAM1-201ENST00000262213 MT-ND3P03897 115 aa18.33■□□□□ 0.52
TRAM1-201ENST00000262213 GNAT1P11488 350 aa18.33■□□□□ 0.52
TRAM1-201ENST00000262213 CHRNA5P30532 468 aa18.33■□□□□ 0.52
TRAM1-201ENST00000262213 BASP1P80723 227 aaKnown RBP18.33■□□□□ 0.52
TRAM1-201ENST00000262213 KRT76Q01546 638 aa18.33■□□□□ 0.52
TRAM1-201ENST00000262213 RNF220Q5VTB9 566 aa18.33■□□□□ 0.52
TRAM1-201ENST00000262213 SAMD3Q8N6K7 520 aa18.33■□□□□ 0.52
TRAM1-201ENST00000262213 SCG3Q8WXD2 468 aaKnown RBP18.33■□□□□ 0.52
TRAM1-201ENST00000262213 ZNF333Q96JL9 665 aa18.33■□□□□ 0.52
TRAM1-201ENST00000262213 PCDH9Q9HC56 1237 aa18.33■□□□□ 0.52
TRAM1-201ENST00000262213 CTDP1Q9Y5B0 961 aaPredicted RBP18.33■□□□□ 0.52
TRAM1-201ENST00000262213 PCDHA10Q9Y5I2 948 aa18.33■□□□□ 0.52
TRAM1-201ENST00000262213 YDJCA8MPS7 323 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 LPXNO60711 386 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 RAD17O75943 681 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 ACADSP16219 412 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 VHLP40337 213 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 SARNPP82979 210 aaKnown RBP18.32■□□□□ 0.52
TRAM1-201ENST00000262213 PSMD6Q15008 389 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 LARGE2Q8N3Y3 721 aa18.32■□□□□ 0.52
TRAM1-201ENST00000262213 TEKT4Q8WW24 435 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms