RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 KLHL11Q9NVR0 708 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 PRKAG3Q9UGI9 489 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 PTPRFP10586 1907 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 ZBTB42B2RXF5 422 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 TTC4O95801 387 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 TGFB3P10600 412 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 MARK3P27448 753 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 LAMTOR4Q0VGL1 99 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 APLFQ8IW19 511 aaPredicted RBP23.81■■□□□ 1.4
MCF2L-201ENST00000261963 ANAPC5Q9UJX4 755 aa23.81■■□□□ 1.4
MCF2L-201ENST00000261963 E7ENQ6 273 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 SRGAP2CP0DJJ0 459 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 RPS6KA3P51812 740 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 MRPS35P82673 323 aaKnown RBP23.8■■□□□ 1.4
MCF2L-201ENST00000261963 CAV1Q03135 178 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 IER5Q5VY09 327 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 ANO7Q6IWH7 933 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 IP6K2Q9UHH9 426 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 GNAT1P11488 350 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 MXRA7P84157 204 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 NFX1Q12986 1120 aaKnown RBP23.8■■□□□ 1.4
MCF2L-201ENST00000261963 KYNUQ16719 465 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 PRUNE1Q86TP1 453 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 LRRC71Q8N4P6 559 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 NIF3L1Q9GZT8 377 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 ETNK1Q9HBU6 452 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 CISHQ9NSE2 258 aa23.8■■□□□ 1.4
MCF2L-201ENST00000261963 CPSF3Q9UKF6 684 aaKnown RBP23.8■■□□□ 1.4
MCF2L-201ENST00000261963 POLR2AP24928 1970 aaKnown RBP23.79■■□□□ 1.4
MCF2L-201ENST00000261963 TMEM120BA0PK00 339 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 PI4K2BG5E9Z4 385 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 SOCS7O14512 581 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 OGTO15294 1046 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 PRKCBP05771 671 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 PCK1P35558 622 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 MCL1Q07820 350 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 RNF149Q8NC42 400 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 FAM167AQ96KS9 214 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 NINJ2Q9NZG7 142 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 KLHL14Q9P2G3 628 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 NKX1-2Q9UD57 310 aaPredicted RBP23.79■■□□□ 1.4
MCF2L-201ENST00000261963 UPP2O95045 317 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 UNC5CO95185 931 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 KLRC2P26717 231 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 ROR2Q01974 943 aaKnown RBP23.79■■□□□ 1.4
MCF2L-201ENST00000261963 OGDHQ02218 1023 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 HSDL1Q3SXM5 330 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 ZNF394Q53GI3 561 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 GPC2Q8N158 579 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 RMDN2Q96LZ7 410 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 FGD4Q96M96 766 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 SERPINB12Q96P63 405 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 GPR20Q99678 358 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 SGIP1Q9BQI5 828 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 RNPEPL1Q9HAU8 725 aa23.79■■□□□ 1.4
MCF2L-201ENST00000261963 IGKV6-21A0A0C4DH24 114 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 CNMDO75829 334 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 LSM8O95777 96 aaKnown RBP23.78■■□□□ 1.4
MCF2L-201ENST00000261963 HOXC6P09630 235 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 KRT10P13645 584 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 CALB2P22676 271 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 WDTC1Q8N5D0 677 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 CKAP2Q8WWK9 683 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 ARHGEF2Q92974 986 aaKnown RBP23.78■■□□□ 1.4
MCF2L-201ENST00000261963 SLITRK1Q96PX8 696 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 PPME1Q9Y570 386 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 DUOXA2Q1HG44 320 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 RNF43Q68DV7 783 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 GADL1Q6ZQY3 521 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 ZNF365Q70YC5 407 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 CCDC89Q8N998 374 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 TFAP2BQ92481 460 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 MCEEQ96PE7 176 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 TXLNGQ9NUQ3 528 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 IVNS1ABPQ9Y6Y0 642 aa23.78■■□□□ 1.4
MCF2L-201ENST00000261963 F8VP50 259 aa23.77■■□□□ 1.4
MCF2L-201ENST00000261963 LGR5O75473 907 aa23.77■■□□□ 1.4
MCF2L-201ENST00000261963 NPTXRO95502 500 aa23.77■■□□□ 1.4
MCF2L-201ENST00000261963 CALB1P05937 261 aa23.77■■□□□ 1.4
MCF2L-201ENST00000261963 ATP6V1C1P21283 382 aa23.77■■□□□ 1.4
MCF2L-201ENST00000261963 CCDC15Q0P6D6 951 aa23.77■■□□□ 1.4
MCF2L-201ENST00000261963 MKRN3Q13064 507 aaKnown RBP23.77■■□□□ 1.4
MCF2L-201ENST00000261963 MAPK6Q16659 721 aa23.77■■□□□ 1.4
MCF2L-201ENST00000261963 MFSD7Q6UXD7 560 aa23.77■■□□□ 1.4
MCF2L-201ENST00000261963 CTNNAL1Q9UBT7 734 aa23.77■■□□□ 1.4
MCF2L-201ENST00000261963 LRRC37A2A6NM11 1700 aa23.77■■□□□ 1.4
MCF2L-201ENST00000261963 WEE2P0C1S8 567 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 CREB1P16220 341 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 RAD23BP54727 409 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 SGSM1Q2NKQ1 1148 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 PARP6Q2NL67 630 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 CMPK2Q5EBM0 449 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 PPP1R15BQ5SWA1 713 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 IZUMO3Q5VZ72 239 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 GPAT2Q6NUI2 795 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 RCOR2Q8IZ40 523 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 ANKRD42Q8N9B4 389 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 UTP4Q969X6 686 aaKnown RBP23.76■■□□□ 1.39
MCF2L-201ENST00000261963 XYLT2Q9H1B5 865 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 HGSO14964 777 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms