RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 GSTT1P30711 240 aa11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 RAP1GDS1P52306 607 aa11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 DCTN2Q13561 401 aaKnown RBP11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 ARHGEF6Q15052 776 aa11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 TFDP3Q5H9I0 405 aa11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 CATSPER4Q7RTX7 472 aa11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 BEST2Q8NFU1 509 aa11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 MAGEC3Q8TD91 643 aa11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 IFT43Q96FT9 208 aa11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 PPP1R16BQ96T49 567 aa11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 SH3GL2Q99962 352 aa11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 SLC13A4Q9UKG4 626 aa11.27□□□□□ -0.6
CSNK1A1-201ENST00000261798 E9PCH4 1651 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 ZNF839A8K0R7 811 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 PSMG1O95456 288 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 PECAM1P16284 738 aaPredicted RBP11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 VCPP55072 806 aaKnown RBP11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 PDAP1Q13442 181 aaKnown RBP11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 LAYNQ6UX15 382 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 KLHL25Q9H0H3 589 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 NARFQ9UHQ1 456 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 TEKT2Q9UIF3 430 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 RPL26L1Q9UNX3 145 aaKnown RBP11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 TMEM247A6NEH6 219 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 TPST1O60507 370 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 RPS6KA4O75676 772 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 PROSCO94903 275 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 PSMA4P25789 261 aaKnown RBP11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 HADHAP40939 763 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 WDR59Q6PJI9 974 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 LDHDQ86WU2 507 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 SNX19Q92543 992 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 PTPRN2Q92932 1015 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 OXNAD1Q96HP4 312 aaPredicted RBP11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 RIT2Q99578 217 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 DDX18Q9NVP1 670 aaKnown RBP11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 PSMD3O43242 534 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 ADARP55265 1226 aaKnown RBP11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 KCNA1Q09470 495 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 FOXD4Q12950 439 aaPredicted RBP11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 XRCC4Q13426 336 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 RNF43Q68DV7 783 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 GPAT2Q6NUI2 795 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 DSTYKQ6XUX3 929 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 CCNJLQ8IV13 435 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 SH2D3AQ9BRG2 576 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 NINJ2Q9NZG7 142 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 STARD13Q9Y3M8 1113 aa11.27□□□□□ -0.61
CSNK1A1-201ENST00000261798 PTPRMP28827 1452 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 ATP6V1C1P21283 382 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 HMOX2P30519 316 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 PTDSS1P48651 473 aaKnown RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 TRIM60Q495X7 471 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 THEMIS2Q5TEJ8 643 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 DEFB107AQ8IZN7 70 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 PPHLN1Q8NEY8 458 aaKnown RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 GDPD5Q8WTR4 605 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 ZNF75CPQ92670 426 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 LRRC4BQ9NT99 713 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 RNF146Q9NTX7 359 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 C16orf72Q14CZ0 275 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 BOLA3Q53S33 107 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 PLEKHA7Q6IQ23 1121 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 TCP10LQ8TDR4 215 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 ITGB1BP2Q9UKP3 347 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 SIK3Q9Y2K2 1263 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 SETD1BQ9UPS6 1966 aaKnown RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 F8W8V4 182 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 LIN7AO14910 233 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 SHOX2O60902 331 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 USP1O94782 785 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 ATP5BP06576 529 aaKnown RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 NUDT17P0C025 328 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 RUNX1T1Q06455 604 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 TBL3Q12788 808 aaKnown RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 MRPL28Q13084 256 aaKnown RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 NME3Q13232 169 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 RIPK1Q13546 671 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 TMEM139Q8IV31 216 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 PAWRQ96IZ0 340 aaKnown RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 NAT9Q9BTE0 207 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 TBC1D10AQ9BXI6 508 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 NYAP2Q9P242 653 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 FAM205AQ6ZU69 1335 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 COL15A1P39059 1388 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 ABLIM1O14639 778 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 RRM1P23921 792 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 SERPINB5P36952 375 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 OTUD4Q01804 1114 aaKnown RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 GIT2Q14161 759 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 ZBTB49Q6ZSB9 765 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 SEPT12Q8IYM1 358 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 PI4K2AQ9BTU6 479 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 DDX3XO00571 662 aaKnown RBP eCLIP11.26□□□□□ -0.611e-25■■■□□ 15.1
CSNK1A1-201ENST00000261798 CNTFP26441 200 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 TPP2P29144 1249 aaPredicted RBP11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 DMC1Q14565 340 aa11.26□□□□□ -0.61
CSNK1A1-201ENST00000261798 CCDC85BQ15834 202 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms