RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 KLRC1P26715 233 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 TUBA4AP68366 448 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 TRAF2Q12933 501 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 XRCC4Q13426 336 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 PRCCQ92733 491 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 COA7Q96BR5 231 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 EGFL8Q99944 293 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 TASP1Q9H6P5 420 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 SAR1AQ9NR31 198 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 MAP3K13O43283 966 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 ADCY6O43306 1168 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 ADRA2BP18089 450 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 VAMP7P51809 220 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 SESN2P58004 480 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 CENPCQ03188 943 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 TRIQKQ629K1 86 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 SCARA5Q6ZMJ2 495 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 PPHLN1Q8NEY8 458 aaKnown RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 GIPC3Q8TF64 312 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 WNK4Q96J92 1243 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 GRIP2Q9C0E4 1043 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 RAB6BQ9NRW1 208 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 H2AFY2Q9P0M6 372 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 MYO3BQ8WXR4 1341 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 ZBTB39O15060 712 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 TMEM253P0C7T8 217 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 AKR1B1P15121 316 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 NUP62P37198 522 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 COILP38432 576 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 TXNRD1Q16881 649 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 SULF1Q8IWU6 871 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 TTLL6Q8N841 843 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 SYTL2Q9HCH5 934 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 WDR70Q9NW82 654 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 CLIC5Q9NZA1 410 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 UBA2Q9UBT2 640 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 XPO7Q9UIA9 1087 aaKnown RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 HBS1LQ9Y450 684 aaKnown RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 KRT87PA6NCN2 255 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 RAD51BO15315 384 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 CLOCKO15516 846 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 TRAPPC3O43617 180 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 EPHB2P29323 1055 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 NR1H2P55055 460 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 CDH6P55285 790 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 ZNF394Q53GI3 561 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 PDZK1Q5T2W1 519 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 MIGA2Q7L4E1 593 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 NARS2Q96I59 477 aaKnown RBP13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 STK33Q9BYT3 514 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 PI4KBQ9UBF8 816 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 KLHL3Q9UH77 587 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 RPAP1Q9BWH6 1393 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 PCP4L1A6NKN8 68 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 ZNF263O14978 683 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 SORBS3O60504 671 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 PSMB9P28065 219 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 KCNJ1P48048 391 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 ATAD3BQ5T9A4 648 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 IKBIPQ70UQ0 350 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 ARHGEF26Q96DR7 871 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 ARHGEF3Q9NR81 526 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 CTNNAL1Q9UBT7 734 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 PIPSLA2A3N6 862 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 TRIM49D1C9J1S8 452 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 POTEIP0CG38 1075 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 DDX5P17844 614 aaKnown RBP13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 RPS6KA3P51812 740 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 CHN2P52757 468 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 UBXN2AP68543 259 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 KLHL17Q6TDP4 642 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 KBTBD2Q8IY47 623 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 SUN5Q8TC36 379 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 UBASH3BQ8TF42 649 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 DHX36Q9H2U1 1008 aaKnown RBP13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 TECPR2O15040 1411 aa13.69□□□□□ -0.22
PCDHGA3-201ENST00000253812 E5RI56 91 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 ATP6V1G1O75348 118 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 PLEKHA8P1O95397 391 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 GNA15P30679 374 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 ATP2C1P98194 919 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 USP10Q14694 798 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 LRRC8DQ7L1W4 858 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 EFL1Q7Z2Z2 1120 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 SVOPQ8N4V2 548 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 TSPAN17Q96FV3 270 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 ECSITQ9BQ95 431 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 MSTO1Q9BUK6 570 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 TMEM120AQ9BXJ8 343 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 RSL24D1Q9UHA3 163 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 ALG6Q9Y672 507 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 JCADQ9P266 1359 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 K7ERI5 159 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 CBX3Q13185 183 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 PID1Q7Z2X4 250 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 MSL3Q8N5Y2 521 aaKnown RBP13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 RORBQ92753 470 aa13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 SYN2Q92777 582 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA3-201ENST00000253812 C6orf62Q9GZU0 229 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms